RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 TXNRD3NBQ6F5E7 133 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 PM20D1Q6GTS8 502 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 TRNP1Q6NT89 227 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 PMF1Q6P1K2 205 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 CYP4V2Q6ZWL3 525 aaPredicted RBP12.99□□□□□ -0.33
SCAF1-202ENST00000595242 SLC26A9Q7LBE3 791 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 SLC22A18ASQ8N1D0 253 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 CARNMT1Q8N4J0 409 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 EMC1Q8N766 993 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 ZSCAN1Q8NBB4 408 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 OR13H1Q8NG92 308 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 C1orf54Q8WWF1 131 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 EDEM1Q92611 657 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 KLK6Q92876 244 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
SCAF1-202ENST00000595242 RPL10LQ96L21 214 aaKnown RBP12.99□□□□□ -0.33
SCAF1-202ENST00000595242 HSFY1Q96LI6 401 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 DNAJC28Q9NX36 388 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 PSD3Q9NYI0 1048 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 DRG1Q9Y295 367 aaKnown RBP12.99□□□□□ -0.33
SCAF1-202ENST00000595242 R3HDM2Q9Y2K5 976 aaKnown RBP12.99□□□□□ -0.33
SCAF1-202ENST00000595242 SNX24Q9Y343 169 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 PCDHGA7Q9Y5G6 932 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 PCDHGA4Q9Y5G9 962 aa12.99□□□□□ -0.33
SCAF1-202ENST00000595242 EME2A4GXA9 379 aaPredicted RBP12.98□□□□□ -0.33
SCAF1-202ENST00000595242 ZNF487B1APH4 448 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 PLD2O14939 933 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 XPO1O14980 1071 aaKnown RBP12.98□□□□□ -0.33
SCAF1-202ENST00000595242 LIASO43766 372 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 RNF8O76064 485 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 TRUB2O95900 331 aaKnown RBP12.98□□□□□ -0.33
SCAF1-202ENST00000595242 VAV1P15498 845 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 KDELR1P24390 212 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 GJC1P36383 396 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 FLT3P36888 993 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 HSD17B3P37058 310 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 SSR1P43307 286 aaKnown RBP12.98□□□□□ -0.33
SCAF1-202ENST00000595242 PTPN9P43378 593 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 KCNJ1P48048 391 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 SLC11A2P49281 568 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 PDX1P52945 283 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 HNRNPKP61978 463 aaKnown RBP eCLIP12.98□□□□□ -0.33
SCAF1-202ENST00000595242 CAV1Q03135 178 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 CNTN1Q12860 1018 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 CDH18Q13634 790 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 MANEAQ5SRI9 462 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 AGBL4Q5VU57 503 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 RNF219Q5W0B1 726 aaPredicted RBP12.98□□□□□ -0.33
SCAF1-202ENST00000595242 OR6B2Q6IFH4 312 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 BBS12Q6ZW61 710 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 BHLHA9Q7RTU4 235 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 GOLGA6L1Q8N7Z2 621 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 HJURPQ8NCD3 748 aaPredicted RBP12.98□□□□□ -0.33
SCAF1-202ENST00000595242 FBXO25Q8TCJ0 367 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 TEKT4Q8WW24 435 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 ATG4AQ8WYN0 398 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 RAPGEF5Q92565 580 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 IFT43Q96FT9 208 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 RUFY1Q96T51 708 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 ULBP1Q9BZM6 244 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 MTRF1LQ9UGC7 380 aaKnown RBP12.98□□□□□ -0.33
SCAF1-202ENST00000595242 ACSL6Q9UKU0 697 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 SARDHQ9UL12 918 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 NFS1Q9Y697 457 aa12.98□□□□□ -0.33
SCAF1-202ENST00000595242 LRBAP50851 2863 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 TYW5A2RUC4 315 aaKnown RBP12.97□□□□□ -0.33
SCAF1-202ENST00000595242 LRRD1A4D1F6 860 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 TULP2O00295 520 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 TP73O15350 636 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 NUDT17P0C025 328 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 LIPCP11150 499 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 ITIH2P19823 946 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 MIPP30301 263 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 CASRP41180 1078 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 STK19P49842 368 aaPredicted RBP12.97□□□□□ -0.33
SCAF1-202ENST00000595242 ARSEP51690 589 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 CLDN2P57739 230 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 RPS24P62847 133 aaKnown RBP12.97□□□□□ -0.33
SCAF1-202ENST00000595242 ADCY2Q08462 1091 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 SPIDRQ14159 915 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 PPP1R7Q15435 360 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 OASLQ15646 514 aaKnown RBP12.97□□□□□ -0.33
SCAF1-202ENST00000595242 PERM1Q5SV97 790 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 FAM46CQ5VWP2 391 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 BSPRYQ5W0U4 402 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 CCDC117Q8IWD4 279 aaPredicted RBP12.97□□□□□ -0.33
SCAF1-202ENST00000595242 TTC13Q8NBP0 860 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 BBOF1Q8ND07 529 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 ZNF548Q8NEK5 533 aaPredicted RBP12.97□□□□□ -0.33
SCAF1-202ENST00000595242 SLC35B2Q8TB61 432 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 CCHCR1Q8TD31 782 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 RXFP2Q8WXD0 754 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 KCTD13Q8WZ19 329 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 SNF8Q96H20 258 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 PRICKLE1Q96MT3 831 aaPredicted RBP12.97□□□□□ -0.33
SCAF1-202ENST00000595242 TBCBQ99426 244 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 HEMGNQ9BXL5 484 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 TRIM31Q9BZY9 425 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 ADNPQ9H2P0 1102 aa12.97□□□□□ -0.33
SCAF1-202ENST00000595242 PREBQ9HCU5 417 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms