RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 OSBPL6Q9BZF3 934 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 FNIP2Q9P278 1114 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 MTRRQ9UBK8 725 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 PSMD13Q9UNM6 376 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 FADS3Q9Y5Q0 445 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 ZDHHC11BP0C7U3 371 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 ATP6V1B1P15313 513 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 ACVRL1P37023 503 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 AQP5P55064 265 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 SLC25A3Q00325 362 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 DSC2Q02487 901 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 STX3Q13277 289 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 POTEHQ6S545 545 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 RANBP10Q6VN20 620 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 ANKRD33Q7Z3H0 272 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 SLC25A51Q9H1U9 297 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 STN1Q9H668 368 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 CDH22Q9UJ99 828 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 SLC39A10Q9ULF5 831 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 POMPQ9Y244 141 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 A0A096LPK6 155 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 H3BSA7 217 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 ITM2AO43736 263 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 GJB5O95377 273 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 CRTAMO95727 393 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 PRKCGP05129 697 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 DNAJB2P25686 324 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 NUP107P57740 925 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 CTBP1Q13363 440 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 C10orf107Q8IVU9 208 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 DENND6AQ8IWF6 608 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 LGI2Q8N0V4 545 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 PQLC1Q8N2U9 271 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 RIN3Q8TB24 985 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 IGSF21Q96ID5 467 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 COX4I2Q96KJ9 171 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 CCT7Q99832 543 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 CWH43Q9H720 699 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 DRGXA6NNA5 263 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 TIMM44O43615 452 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 LYPLA1O75608 230 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 GJB3O75712 270 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 SEC24AO95486 1093 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 PROCP04070 461 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 TACR2P21452 398 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 ATP5C1P36542 298 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 HALP42357 657 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 COPAP53621 1224 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 PFKPQ01813 784 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 RING1Q06587 406 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 PDAP1Q13442 181 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 IKBKEQ14164 716 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 GRM3Q14832 879 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 PCLAFQ15004 111 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 STXBP5Q5T5C0 1151 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 MBLAC2Q68D91 279 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 IMP4Q96G21 291 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 RILPQ96NA2 401 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 PPP1R2P1Q96PQ5 205 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 PRPF18Q99633 342 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 SAGE1Q9NXZ1 904 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 TUBA8Q9NY65 449 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 DNMT3LQ9UJW3 386 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 ATP11BQ9Y2G3 1177 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 TMEM98Q9Y2Y6 226 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 TCAF1Q9Y4C2 921 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 AP4B1Q9Y6B7 739 aa17.14■□□□□ 0.33
SHKBP1-205ENST00000594973 MPP1Q00013 466 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 RARS2Q5T160 578 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 TMEM53Q6P2H8 277 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 CLSTN3Q9BQT9 956 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 COMMD8Q9NX08 183 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 FNDC1Q4ZHG4 1894 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 MEI4A8MW99 385 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 F5H5T6 163 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 SNNO75324 88 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 AHSGP02765 367 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 C2P06681 752 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 ZNF23P17027 643 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 ARNTP27540 789 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 SLC6A4P31645 630 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 AVPR1AP37288 418 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 MAGEA12P43365 314 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 TUFMP49411 452 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 EPHB1P54762 984 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 CSE1LP55060 971 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 IHHQ14623 411 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 KDELC1Q6UW63 502 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 GIPC3Q8TF64 312 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 TTLL2Q9BWV7 592 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 CYP4F11Q9HBI6 524 aa17.13■□□□□ 0.33
SHKBP1-205ENST00000594973 A0A0D9SEW6 157 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 CCDC162PA2VCL2 907 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 FGF3P11487 239 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 GABRB3P28472 473 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 ARCN1P48444 511 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 SERINC3Q13530 473 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 UBAP2LQ14157 1087 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 BCL2A1Q16548 175 aa17.12■□□□□ 0.33
SHKBP1-205ENST00000594973 INSCQ1MX18 579 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms