RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	CCL4	P13236	92 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	ZNF143	P52747	638 aa	Predicted RBP	18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	RPL7A	P62424	266 aa	Known RBP	18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	SRSF1	Q07955	248 aa	Known RBP eCLIP	18.35	■□□□□ 0.53	1e-12	■□□□□ 8.7
CIRBP-238	ENST00000592412	GRM3	Q14832	879 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	PPP1R15B	Q5SWA1	713 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	SCYL2	Q6P3W7	929 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	TRIM72	Q6ZMU5	477 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	ZNF574	Q6ZN55	896 aa	Predicted RBP	18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	ATG14	Q6ZNE5	492 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	NRROS	Q86YC3	692 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	TUBGCP5	Q96RT8	1024 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	CMKLR1	Q99788	373 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	SELENOO	Q9BVL4	669 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	CLSTN2	Q9H4D0	955 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	CATSPERB	Q9H7T0	1116 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	NLRC4	Q9NPP4	1024 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	SPATS2L	Q9NUQ6	558 aa	Known RBP	18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	SEPT10	Q9P0V9	454 aa		18.35	■□□□□ 0.53
CIRBP-238	ENST00000592412	CACNB4	O00305	520 aa	Predicted RBP	18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	TNFRSF10C	O14798	259 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	FUCA1	P04066	466 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	EEF1G	P26641	437 aa	Known RBP	18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	NSF	P46459	744 aa	Known RBP	18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	CSNK1D	P48730	415 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	MAZ	P56270	477 aa	Known RBP	18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	OGDH	Q02218	1023 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	PHF19	Q5T6S3	580 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	AFMID	Q63HM1	303 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	ZNF438	Q7Z4V0	828 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	SRL	Q86TD4	932 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	PTCD2	Q8WV60	388 aa	Known RBP	18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	NUDT22	Q9BRQ3	303 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	SLC39A8	Q9C0K1	460 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	DPEP2	Q9H4A9	486 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	CYP4F12	Q9HCS2	524 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	GPATCH2L	Q9NWQ4	482 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	ST14	Q9Y5Y6	855 aa		18.34	■□□□□ 0.53
CIRBP-238	ENST00000592412	TEX15	Q9BXT5	2789 aa		18.33	■□□□□ 0.53
CIRBP-238	ENST00000592412	PRSS38	A1L453	326 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	TRAFD1	O14545	582 aa	Predicted RBP	18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	FGF10	O15520	208 aa	Predicted RBP	18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	PAPOLA	P51003	745 aa	Known RBP	18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	OR1D5	P58170	312 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	ARHGEF7	Q14155	803 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	NR1D2	Q14995	579 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	CFAP58	Q5T655	872 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	DPPA4	Q7L190	304 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	ARHGAP12	Q8IWW6	846 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	RCBTB1	Q8NDN9	531 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	GPBAR1	Q8TDU6	330 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	JPH3	Q8WXH2	748 aa	Predicted RBP	18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	MCEE	Q96PE7	176 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	VPS16	Q9H269	839 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	ATP13A3	Q9H7F0	1226 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	SIK3	Q9Y2K2	1263 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	DOPEY2	Q9Y3R5	2298 aa		18.33	■□□□□ 0.52
CIRBP-238	ENST00000592412	CPNE6	O95741	557 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	FGF1	P05230	155 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	CALB1	P05937	261 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	ELFN1	P0C7U0	828 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	CD82	P27701	267 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	SERPINA4	P29622	427 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	NDST2	P52849	883 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	AIF1	P55008	147 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	CA9	Q16790	459 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	MAP9	Q49MG5	647 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	COLEC12	Q5KU26	742 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	PNCK	Q6P2M8	343 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	ARHGAP36	Q6ZRI8	547 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	CNPY3	Q9BT09	278 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	SLC12A9	Q9BXP2	914 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	B3GNT4	Q9C0J1	378 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	WDR26	Q9H7D7	661 aa		18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	GEMIN8	Q9NWZ8	242 aa	Known RBP	18.32	■□□□□ 0.52
CIRBP-238	ENST00000592412	IGHV5-10-1	A0A0J9YXX1	117 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412		A8MX80	341 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	FGF3	P11487	239 aa	Predicted RBP	18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	CCNB1	P14635	433 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	KEL	P23276	732 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	TPI1	P60174	286 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	KRT31	Q15323	416 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	AMZ1	Q400G9	498 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	CDKAL1	Q5VV42	579 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	DNAJC24	Q6P3W2	148 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	PIM3	Q86V86	326 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	NPW	Q8N729	165 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	ZSCAN1	Q8NBB4	408 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	PATE1	Q8WXA2	126 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	COQ10A	Q96MF6	247 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	SLC25A18	Q9H1K4	315 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	PCDHB11	Q9Y5F2	797 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	NBAS	A2RRP1	2371 aa		18.31	■□□□□ 0.52
CIRBP-238	ENST00000592412	TEX33	O43247	280 aa		18.3	■□□□□ 0.52
CIRBP-238	ENST00000592412	PPFIA2	O75334	1257 aa		18.3	■□□□□ 0.52
CIRBP-238	ENST00000592412	PALM	O75781	387 aa		18.3	■□□□□ 0.52
CIRBP-238	ENST00000592412	CEACAM5	P06731	702 aa		18.3	■□□□□ 0.52
CIRBP-238	ENST00000592412	SFTPC	P11686	197 aa		18.3	■□□□□ 0.52
CIRBP-238	ENST00000592412	AK4	P27144	223 aa	Predicted RBP	18.3	■□□□□ 0.52

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