RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ZNF385DQ9H6B1 395 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 SMURF2Q9HAU4 748 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 AGPAT4Q9NRZ5 378 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 HMGXB4Q9UGU5 601 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 PCDHB3Q9Y5E6 796 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 ZFC3H1O60293 1989 aaKnown RBP15.23■□□□□ 0.03
CIRBP-228ENST00000590347 PMM2O15305 246 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 KRT19P08727 400 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 CYP3A5P20815 502 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 ALDH7A1P49419 539 aaKnown RBP15.23■□□□□ 0.03
CIRBP-228ENST00000590347 LAPTM5Q13571 262 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 GRM3Q14832 879 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 CTF1Q16619 201 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 STK32CQ86UX6 486 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 CNTD1Q8N815 330 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 TERB1Q8NA31 727 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 ZNF560Q96MR9 790 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 RNF145Q96MT1 663 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 TNKS2Q9H2K2 1166 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 CCDC177Q9NQR7 707 aaPredicted RBP15.23■□□□□ 0.03
CIRBP-228ENST00000590347 OXSMQ9NWU1 459 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 GLULP15104 373 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 IL4RP24394 825 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 KIF19Q2TAC6 998 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 PLA2G4EQ3MJ16 856 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 DALRD3Q5D0E6 543 aaKnown RBP15.23■□□□□ 0.03
CIRBP-228ENST00000590347 NBPF12Q5TAG4 269 aaPredicted RBP15.23■□□□□ 0.03
CIRBP-228ENST00000590347 NXNL2Q5VZ03 156 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 OR6B2Q6IFH4 312 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 TP53INP2Q8IXH6 220 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 ARNTL2Q8WYA1 636 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 GPN2Q9H9Y4 310 aaPredicted RBP15.23■□□□□ 0.03
CIRBP-228ENST00000590347 XPR1Q9UBH6 696 aa15.23■□□□□ 0.03
CIRBP-228ENST00000590347 MRPL42Q9Y6G3 142 aaKnown RBP15.23■□□□□ 0.03
CIRBP-228ENST00000590347 ARHGAP33O14559 1287 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 UBDO15205 165 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 CPNE6O95741 557 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 SBK3P0C264 359 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 GP2P55259 537 aaKnown RBP15.22■□□□□ 0.03
CIRBP-228ENST00000590347 PPP2R2BQ00005 443 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 ATP6AP1Q15904 470 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 ATAD3CQ5T2N8 411 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 CCBE1Q6UXH8 406 aaPredicted RBP15.22■□□□□ 0.03
CIRBP-228ENST00000590347 OR52K1Q8NGK4 314 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 GAD1Q99259 594 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 COL20A1Q9P218 1284 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 CD300AQ9UGN4 299 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 TRIM64BA6NI03 449 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 MAPTP10636 758 aaKnown RBP15.22■□□□□ 0.03
CIRBP-228ENST00000590347 PSMB9P28065 219 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 GP5P40197 560 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 IL1RL1Q01638 556 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 HERC3Q15034 1050 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 SAMD4BQ5PRF9 694 aaKnown RBP15.22■□□□□ 0.03
CIRBP-228ENST00000590347 HID1Q8IV36 788 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 GALNT12Q8IXK2 581 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 MICALL2Q8IY33 904 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 NLGN4XQ8N0W4 816 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 TTC39CQ8N584 583 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 PHF21BQ96EK2 531 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 CENPNQ96H22 339 aaPredicted RBP15.22■□□□□ 0.03
CIRBP-228ENST00000590347 CCDC120Q96HB5 630 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 VPS35Q96QK1 796 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 ADAMTS10Q9H324 1103 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 C12orf4Q9NQ89 552 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 IARS2Q9NSE4 1012 aaKnown RBP15.22■□□□□ 0.03
CIRBP-228ENST00000590347 CCM2LQ9NUG4 571 aaPredicted RBP15.22■□□□□ 0.03
CIRBP-228ENST00000590347 THG1LQ9NWX6 298 aaKnown RBP15.22■□□□□ 0.03
CIRBP-228ENST00000590347 UBP1Q9NZI7 540 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 MAT2BQ9NZL9 334 aa15.22■□□□□ 0.03
CIRBP-228ENST00000590347 SYNJ2BP-COX16A0A087WUM0 186 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 LRRIQ4A6NIV6 560 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 TTC34A8MYJ7 566 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 TFECO14948 347 aaPredicted RBP15.21■□□□□ 0.03
CIRBP-228ENST00000590347 TIMM44O43615 452 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 ITIH1P19827 911 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 CBLP22681 906 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 WEE1P30291 646 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 HADHAP40939 763 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 GJA9P57773 515 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 GNG2P59768 71 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 Q5BKY6 102 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 LINC00523Q86TU6 105 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 DCP2Q8IU60 420 aaKnown RBP15.21■□□□□ 0.03
CIRBP-228ENST00000590347 LYSMD2Q8IV50 215 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 ACMSDQ8TDX5 336 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 TMEM74Q96NL1 305 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 C14orf119Q9NWQ9 140 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 COX16Q9P0S2 106 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 C12orf71A8MTZ7 269 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 NFKBIEO00221 500 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 DLX3O60479 287 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 HUS1O60921 280 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 ABCB7O75027 752 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 TOMM70O94826 608 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 RASAL1O95294 804 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 DNTTP04053 509 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 SNRPB2P08579 225 aaKnown RBP15.21■□□□□ 0.03
CIRBP-228ENST00000590347 PSMB4P28070 264 aa15.21■□□□□ 0.03
CIRBP-228ENST00000590347 XYLT1Q86Y38 959 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms