RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 GOLGA8KD6RF30 607 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 UPK3BL2E5RIL1 263 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 POC1B-GALNT4F8VUJ3 575 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 GOLGA8TH3BQL2 631 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 PLK4O00444 970 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 MAN2B1O00754 1011 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 UGT1A9O60656 530 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 PAPSS2O95340 614 aaPredicted RBP11.33□□□□□ -0.6
VMP1-207ENST00000588131 CRTAMO95727 393 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 IL1BP01584 269 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 F7P08709 466 aaPredicted RBP11.33□□□□□ -0.6
VMP1-207ENST00000588131 LHCGRP22888 699 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 ARCN1P48444 511 aaKnown RBP11.33□□□□□ -0.6
VMP1-207ENST00000588131 PSMD8P48556 350 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 COPAP53621 1224 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 EIF3BP55884 814 aaKnown RBP11.33□□□□□ -0.6
VMP1-207ENST00000588131 ACVR1Q04771 509 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 FRG1Q14331 258 aaKnown RBP11.33□□□□□ -0.6
VMP1-207ENST00000588131 E2F5Q15329 346 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 UGP2Q16851 508 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 KLHL38Q2WGJ6 581 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 KRT71Q3SY84 523 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 KIAA0930Q6ICG6 404 aaPredicted RBP11.33□□□□□ -0.6
VMP1-207ENST00000588131 BRAT1Q6PJG6 821 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 CRTC1Q6UUV9 634 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 CYS1Q717R9 158 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 KCNMB4Q86W47 210 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 RASSF3Q86WH2 238 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 CACUL1Q86Y37 369 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 ZNF687Q8N1G0 1237 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 OR4K2Q8NGD2 314 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 RPLP0P6Q8NHW5 317 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 KCNV2Q8TDN2 545 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 STYXQ8WUJ0 223 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 SCRN2Q96FV2 425 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 MCCC1Q96RQ3 725 aaPredicted RBP11.33□□□□□ -0.6
VMP1-207ENST00000588131 LYSMD1Q96S90 227 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 RUFY1Q96T51 708 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 CYTH2Q99418 400 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 TMEM109Q9BVC6 243 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 GPR63Q9BZJ6 419 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 RSPH9Q9H1X1 276 aaPredicted RBP11.33□□□□□ -0.6
VMP1-207ENST00000588131 ACBD3Q9H3P7 528 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 UGT1A7Q9HAW7 530 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 UGT1A10Q9HAW8 530 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 UGT1A8Q9HAW9 530 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 C20orf96Q9NUD7 363 aaPredicted RBP11.33□□□□□ -0.6
VMP1-207ENST00000588131 HACD3Q9P035 362 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 DKK3Q9UBP4 350 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 B4GALT6Q9UBX8 382 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 GGT7Q9UJ14 662 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 RIMKLBQ9ULI2 386 aa11.33□□□□□ -0.6
VMP1-207ENST00000588131 C1orf232A0A0U1RR37 186 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 A0A1W2PQF6 199 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 TLDC2A0PJX2 215 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 OR51F1A6NGY5 319 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 C2orf81A6NN90 581 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 C1QTNF3-AMACRE9PGA6 284 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 RASGRF2O14827 1237 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 SPINT1O43278 529 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 SYNCRIPO60506 623 aaKnown RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 TCEA3O75764 348 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 RPP40O75818 363 aaKnown RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 FAM155BO75949 473 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 VAPBO95292 243 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 CLDN7O95471 211 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 SYF2O95926 243 aaKnown RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 C1SP09871 688 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 HOXB2P14652 356 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 LPOP22079 712 aaPredicted RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 PSMA3P25788 255 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 ITGB7P26010 798 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 TARSP26639 723 aaKnown RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 POLR2LP62875 67 aaKnown RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 SATB1Q01826 763 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 PRKCQQ04759 706 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 MGAT5Q09328 741 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 RALGDSQ12967 914 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 LAMB3Q13751 1172 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 FBXO43Q4G163 708 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 HSP90AA5PQ58FG0 334 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 LRRC66Q68CR7 880 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 SDE2Q6IQ49 451 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 ZNF852Q6ZMS4 543 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 Q6ZS52 159 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 USP45Q70EL2 814 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 MARK2Q7KZI7 788 aaKnown RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 NLRP9Q7RTR0 991 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 TRMT11Q7Z4G4 463 aaKnown RBP11.32□□□□□ -0.6
VMP1-207ENST00000588131 DSG4Q86SJ6 1040 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 CTAGE3PQ8IX95 158 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 NDUFAF2Q8N183 169 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 PPM1NQ8N819 430 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 HCAR2Q8TDS4 363 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 DCAKDQ8WVC6 231 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 ARL8AQ96BM9 186 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 TBATAQ96M53 351 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 PAFAH2Q99487 392 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 AGAP2Q99490 1192 aa11.32□□□□□ -0.6
VMP1-207ENST00000588131 SH3GL2Q99962 352 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms