RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 RNF8O76064 485 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 ITIH1P19827 911 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 KELP23276 732 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 CCKBRP32239 447 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 KIAA1024LP59773 190 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 IL10RBQ08334 325 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 NSUN2Q08J23 767 aaKnown RBP eCLIP14.2□□□□□ -0.14
ERCC1-205ENST00000587888 SRSF6Q13247 344 aaKnown RBP14.2□□□□□ -0.14
ERCC1-205ENST00000587888 CERCAMQ5T4B2 595 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 AFMIDQ63HM1 303 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 USP53Q70EK8 1073 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 DPPA4Q7L190 304 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 TP53INP2Q8IXH6 220 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 PELI3Q8N2H9 469 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 NPWQ8N729 165 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 PDCD6IPQ8WUM4 868 aaKnown RBP14.2□□□□□ -0.14
ERCC1-205ENST00000587888 ECHDC3Q96DC8 303 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 NSMCE3Q96MG7 304 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 ANO10Q9NW15 660 aa14.2□□□□□ -0.14
ERCC1-205ENST00000587888 PRAMEF33A0A0G2JMD5 474 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 TMEM191CA6NGB0 347 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 TRAFD1O14545 582 aaPredicted RBP14.19□□□□□ -0.14
ERCC1-205ENST00000587888 TNFRSF10CO14798 259 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 NVLO15381 856 aaKnown RBP14.19□□□□□ -0.14
ERCC1-205ENST00000587888 PRPSAP2O60256 369 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 PRAMEF10O60809 474 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 GM2AP17900 193 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 MIPP30301 263 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 TRIM23P36406 574 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 RENBPP51606 427 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 MAPK10P53779 464 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 ZFP36L1Q07352 338 aaKnown RBP14.19□□□□□ -0.14
ERCC1-205ENST00000587888 SLC10A7Q0GE19 358 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 LBRQ14739 615 aaKnown RBP14.19□□□□□ -0.14
ERCC1-205ENST00000587888 AMZ1Q400G9 498 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 C14orf28Q4W4Y0 310 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 PHF19Q5T6S3 580 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 SPECC1LQ69YQ0 1117 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 PLEKHA7Q6IQ23 1121 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 RBM43Q6ZSC3 357 aaKnown RBP14.19□□□□□ -0.14
ERCC1-205ENST00000587888 TMPRSS9Q7Z410 1059 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 SPRED1Q7Z699 444 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 ZFAND4Q86XD8 727 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 USP7Q93009 1102 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 TRIM7Q9C029 511 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 SEMA6CQ9H3T2 930 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 WDR26Q9H7D7 661 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 SPATS2LQ9NUQ6 558 aaKnown RBP14.19□□□□□ -0.14
ERCC1-205ENST00000587888 CWC15Q9P013 229 aaKnown RBP14.19□□□□□ -0.14
ERCC1-205ENST00000587888 B4GALT6Q9UBX8 382 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 PCDHGC4Q9Y5F7 938 aa14.19□□□□□ -0.14
ERCC1-205ENST00000587888 MGAQ8IWI9 3026 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 PRSS38A1L453 326 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 EIF3CLB5ME19 914 aaKnown RBP14.18□□□□□ -0.14
ERCC1-205ENST00000587888 PDE2AO00408 941 aaPredicted RBP14.18□□□□□ -0.14
ERCC1-205ENST00000587888 SLC28A2O43868 658 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 FTLP02792 175 aaPredicted RBP14.18□□□□□ -0.14
ERCC1-205ENST00000587888 HOXC4P09017 264 aaPredicted RBP14.18□□□□□ -0.14
ERCC1-205ENST00000587888 ATP1A3P13637 1013 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 PNLIPP16233 465 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 ALDH4A1P30038 563 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 ETV5P41161 510 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 MAZP56270 477 aaKnown RBP14.18□□□□□ -0.14
ERCC1-205ENST00000587888 OR1D5P58170 312 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 HLTFQ14527 1009 aaKnown RBP eCLIP14.18□□□□□ -0.14
ERCC1-205ENST00000587888 RFTN1Q14699 578 aaPredicted RBP14.18□□□□□ -0.14
ERCC1-205ENST00000587888 STX1AQ16623 288 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 LINC00303Q3SY05 128 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 APTXQ7Z2E3 356 aaKnown RBP14.18□□□□□ -0.14
ERCC1-205ENST00000587888 EXD3Q8N9H8 876 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 NUS1Q96E22 293 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 COQ10AQ96MF6 247 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 EIF3CQ99613 913 aaKnown RBP14.18□□□□□ -0.14
ERCC1-205ENST00000587888 CMKLR1Q99788 373 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 ARHGAP9Q9BRR9 750 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 HSD3B7Q9H2F3 369 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 CARS2Q9HA77 564 aaKnown RBP14.18□□□□□ -0.14
ERCC1-205ENST00000587888 RDH14Q9HBH5 336 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 SEPT10Q9P0V9 454 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 MYO1AQ9UBC5 1043 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 SEPT3Q9UH03 358 aa14.18□□□□□ -0.14
ERCC1-205ENST00000587888 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.17□□□□□ -0.14
ERCC1-205ENST00000587888 GOLGA6CA6NDK9 693 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 GOLGA6BA6NDN3 693 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 RHPN2P1A8MT19 583 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 B4GAT1O43505 415 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 NUDT21O43809 227 aaKnown RBP14.17□□□□□ -0.14
ERCC1-205ENST00000587888 FUCA1P04066 466 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 FGF1P05230 155 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 GOLGA6DP0CG33 693 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 LIPCP11150 499 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 GNPDA1P46926 289 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 HCAR3P49019 387 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 AP1S1P61966 158 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 B4GALNT1Q00973 533 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 NFATC3Q12968 1075 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 NCAPHQ15003 741 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 PTPRRQ15256 657 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 MANEAQ5SRI9 462 aa14.17□□□□□ -0.14
ERCC1-205ENST00000587888 PPP1R2P3Q6NXS1 205 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms