RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 CRY1Q16526 586 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 DENND2CQ68D51 928 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 KIAA0930Q6ICG6 404 aaPredicted RBP16.18■□□□□ 0.18
SS18-226ENST00000585241 TMEM92Q6UXU6 159 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 C3orf62Q6ZUJ4 267 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 ERN2Q76MJ5 926 aaKnown RBP16.18■□□□□ 0.18
SS18-226ENST00000585241 DPPA4Q7L190 304 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 SYT13Q7L8C5 426 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 GLT6D1Q7Z4J2 308 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 IQCKQ8N0W5 287 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 PJA1Q8NG27 643 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 STYXQ8WUJ0 223 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 UBLCP1Q8WVY7 318 aaPredicted RBP16.18■□□□□ 0.18
SS18-226ENST00000585241 RAB7BQ96AH8 199 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 ZNF669Q96BR6 464 aaPredicted RBP16.18■□□□□ 0.18
SS18-226ENST00000585241 MFSD3Q96ES6 412 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 CFAP36Q96G28 342 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 ZNF778Q96MU6 729 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 FCRL3Q96P31 734 aaPredicted RBP16.18■□□□□ 0.18
SS18-226ENST00000585241 CHRDQ9H2X0 955 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 PCDH12Q9NPG4 1184 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 MOCS1Q9NZB8 636 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 B4GALT6Q9UBX8 382 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 SCML1Q9UN30 329 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 RPS6KL1Q9Y6S9 549 aa16.18■□□□□ 0.18
SS18-226ENST00000585241 A0A087WUV0 522 aaPredicted RBP16.17■□□□□ 0.18
SS18-226ENST00000585241 TCRBV9S1A1TA0A576 114 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 C2orf81A6NN90 581 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 ATG13O75143 517 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 ADRB3P13945 408 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 ZNF30P17039 623 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 LPOP22079 712 aaPredicted RBP16.17■□□□□ 0.18
SS18-226ENST00000585241 LHCGRP22888 699 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 VIPR1P32241 457 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 PHBP35232 272 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 MMP12P39900 470 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 RPS9P46781 194 aaKnown RBP16.17■□□□□ 0.18
SS18-226ENST00000585241 SIGLEC14Q08ET2 396 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 RALGDSQ12967 914 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 SEPT6Q14141 434 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 SLC29A2Q14542 456 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 PTPRRQ15256 657 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 CRTC1Q6UUV9 634 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 LYSMD3Q7Z3D4 306 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 RAVER1Q8IY67 606 aaKnown RBP16.17■□□□□ 0.18
SS18-226ENST00000585241 CBARPQ8N350 705 aaPredicted RBP16.17■□□□□ 0.18
SS18-226ENST00000585241 AADATQ8N5Z0 425 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 PAF1Q8N7H5 531 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.17■□□□□ 0.18
SS18-226ENST00000585241 OR13J1Q8NGT2 312 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 EID2BQ96D98 161 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 NECAB3Q96P71 396 aaPredicted RBP16.17■□□□□ 0.18
SS18-226ENST00000585241 IER2Q9BTL4 223 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 VIPAS39Q9H9C1 493 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 ZFYVE1Q9HBF4 777 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 DYRK4Q9NR20 520 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 NLE1Q9NVX2 485 aaPredicted RBP16.17■□□□□ 0.18
SS18-226ENST00000585241 ZNF446Q9NWS9 450 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 IL17CQ9P0M4 197 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 ARL5AQ9Y689 179 aa16.17■□□□□ 0.18
SS18-226ENST00000585241 H7C0S8 307 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 MAP2K7O14733 419 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 MID1O15344 667 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 AP1G1O43747 822 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 ARNTP27540 789 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 STX2P32856 288 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 P2RY2P41231 377 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 ARCN1P48444 511 aaKnown RBP16.16■□□□□ 0.18
SS18-226ENST00000585241 DGKEP52429 567 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 ELP6Q0PNE2 266 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 CNTN1Q12860 1018 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 PIP5KL1Q5T9C9 394 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 AGBL4Q5VU57 503 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 ESRP1Q6NXG1 681 aaKnown RBP16.16■□□□□ 0.18
SS18-226ENST00000585241 ERAP2Q6P179 960 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 HDXQ7Z353 690 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 TTC7BQ86TV6 843 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 TMPRSS6Q8IU80 811 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.16■□□□□ 0.18
SS18-226ENST00000585241 EDAQ92838 391 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 ACSS3Q9H6R3 686 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 VPS37BQ9H9H4 285 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 SLC2A6Q9UGQ3 507 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 KCTD3Q9Y597 815 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 NFS1Q9Y697 457 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 SCN8AQ9UQD0 1980 aa16.16■□□□□ 0.18
SS18-226ENST00000585241 NCOR1O75376 2440 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 C1orf232A0A0U1RR37 186 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 FAM159BA6NKW6 160 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 H0Y858 1186 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 PSMD11O00231 422 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 SLC7A4O43246 635 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 TCEA3O75764 348 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 PAMP19021 973 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 XPAP23025 273 aaPredicted RBP16.15■□□□□ 0.18
SS18-226ENST00000585241 STC1P52823 247 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 CCDC15Q0P6D6 951 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 CNGA3Q16281 694 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 SKIDA1Q1XH10 827 aa16.15■□□□□ 0.18
SS18-226ENST00000585241 POM121L1PQ3SYA9 428 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms