RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 FEM1CQ96JP0 617 aa12.04□□□□□ -0.48
GGA3-217ENST00000583667 SPON2Q9BUD6 331 aa12.04□□□□□ -0.48
GGA3-217ENST00000583667 SSU72Q9NP77 194 aaKnown RBP12.04□□□□□ -0.48
GGA3-217ENST00000583667 NT5MQ9NPB1 228 aa12.04□□□□□ -0.48
GGA3-217ENST00000583667 OBP2AQ9NY56 170 aa12.04□□□□□ -0.48
GGA3-217ENST00000583667 GTSE1Q9NYZ3 720 aa12.04□□□□□ -0.48
GGA3-217ENST00000583667 PSMC3IPQ9P2W1 217 aaPredicted RBP12.04□□□□□ -0.48
GGA3-217ENST00000583667 SOX13Q9UN79 622 aa12.04□□□□□ -0.48
GGA3-217ENST00000583667 URB1O60287 2271 aaKnown RBP12.04□□□□□ -0.48
GGA3-217ENST00000583667 MT-CYBP00156 380 aaPredicted RBP12.03□□□□□ -0.48
GGA3-217ENST00000583667 ADRA1DP25100 572 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 CNTFP26441 200 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 MSH2P43246 934 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
GGA3-217ENST00000583667 SESN2P58004 480 aaPredicted RBP12.03□□□□□ -0.48
GGA3-217ENST00000583667 ARF5P84085 180 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 FCHO2Q0JRZ9 810 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 LMAN2Q12907 356 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 DNAJC3Q13217 504 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 LAMB3Q13751 1172 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 SPARCL1Q14515 664 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 DMC1Q14565 340 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 ZNF235Q14590 738 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 IHHQ14623 411 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 KBTBD12Q3ZCT8 623 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 ANKRD20A4Q4UJ75 823 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 LGSNQ5TDP6 509 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 PMS2CLQ68D20 193 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 RETSATQ6NUM9 610 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 SLC26A11Q86WA9 606 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 ARID3BQ8IVW6 561 aaPredicted RBP12.03□□□□□ -0.48
GGA3-217ENST00000583667 ADGRG2Q8IZP9 1017 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 CARNMT1Q8N4J0 409 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 SH2D3CQ8N5H7 860 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.03□□□□□ -0.48
GGA3-217ENST00000583667 DNAAF3Q8N9W5 541 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 DDI1Q8WTU0 396 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 DCAKDQ8WVC6 231 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 HHIPQ96QV1 700 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 NUDCD1Q96RS6 583 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 C2orf49Q9BVC5 232 aaPredicted RBP12.03□□□□□ -0.48
GGA3-217ENST00000583667 MUC3BQ9H195 1237 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 CENPHQ9H3R5 247 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 SYBUQ9NX95 663 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 SAMD15Q9P1V8 674 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 BCCIPQ9P287 314 aaKnown RBP eCLIP12.03□□□□□ -0.48
GGA3-217ENST00000583667 EVLQ9UI08 416 aaPredicted RBP12.03□□□□□ -0.48
GGA3-217ENST00000583667 FBXO10Q9UK96 956 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 RIMKLBQ9ULI2 386 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 CCL26Q9Y258 94 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 INVSQ9Y283 1065 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 MAD1L1Q9Y6D9 718 aa12.03□□□□□ -0.48
GGA3-217ENST00000583667 A0A087WV48 116 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 ZCWPW2A0A1B0GU75 182 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 POC1B-GALNT4F8VUJ3 575 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 MUSKO15146 869 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 SHOX2O60902 331 aaPredicted RBP12.02□□□□□ -0.49
GGA3-217ENST00000583667 USP12O75317 370 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 SERPINF2P08697 491 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 HLA-DPA1P20036 260 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 PSMA3P25788 255 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 MZF1P28698 734 aaPredicted RBP12.02□□□□□ -0.49
GGA3-217ENST00000583667 SLCO1A2P46721 670 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 SERPINB9P50453 376 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 SRSF1Q07955 248 aaKnown RBP eCLIP12.02□□□□□ -0.49
GGA3-217ENST00000583667 MGAT5Q09328 741 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 CDH18Q13634 790 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 CRYMQ14894 314 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 CERCAMQ5T4B2 595 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 MARK2Q7KZI7 788 aaKnown RBP12.02□□□□□ -0.49
GGA3-217ENST00000583667 NLRP9Q7RTR0 991 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 CYP2U1Q7Z449 544 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 TRABD2AQ86V40 505 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 ZNF354CQ86Y25 554 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 MFN1Q8IWA4 741 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 CYP4X1Q8N118 509 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 LSM14AQ8ND56 463 aaKnown RBP12.02□□□□□ -0.49
GGA3-217ENST00000583667 RIN3Q8TB24 985 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 MZB1Q8WU39 189 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 ADAMTS14Q8WXS8 1223 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 PIGKQ92643 395 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 E2F7Q96AV8 911 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 ISG20Q96AZ6 181 aaKnown RBP12.02□□□□□ -0.49
GGA3-217ENST00000583667 MTBPQ96DY7 904 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 PAFAH2Q99487 392 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 SEMA3CQ99985 751 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 CLMPQ9H6B4 373 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 SPHK2Q9NRA0 654 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 ABCB8Q9NUT2 735 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 UBP1Q9NZI7 540 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 DKK4Q9UBT3 224 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 EBF1Q9UH73 591 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 RPS6KL1Q9Y6S9 549 aa12.02□□□□□ -0.49
GGA3-217ENST00000583667 HELZP42694 1942 aaKnown RBP12.01□□□□□ -0.49
GGA3-217ENST00000583667 SHROOM3Q8TF72 1996 aa12.01□□□□□ -0.49
GGA3-217ENST00000583667 IQANK1A0A1B0GTG1 560 aa12.01□□□□□ -0.49
GGA3-217ENST00000583667 CBX4O00257 560 aa12.01□□□□□ -0.49
GGA3-217ENST00000583667 INSIG1O15503 277 aa12.01□□□□□ -0.49
GGA3-217ENST00000583667 PMPCBO75439 489 aa12.01□□□□□ -0.49
GGA3-217ENST00000583667 PRAMEF12O95522 483 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms