RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TPCN2Q8NHX9 752 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 PIH1D2Q8WWB5 315 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 ZCCHC14Q8WYQ9 949 aaKnown RBP19.55■□□□□ 0.72
SREBF1-220ENST00000581707 TSACCQ96A04 125 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-220ENST00000581707 APOLD1Q96LR9 279 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 TBATAQ96M53 351 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 COQ10AQ96MF6 247 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 ZMIZ1Q9ULJ6 1067 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 PPIL1Q9Y3C6 166 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 ALG6Q9Y672 507 aa19.55■□□□□ 0.72
SREBF1-220ENST00000581707 TPP1O14773 563 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 FZD6O60353 706 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 GCATO75600 419 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 HEXIM1O94992 359 aaKnown RBP19.54■□□□□ 0.72
SREBF1-220ENST00000581707 JCHAINP01591 159 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 HLA-DQB2P05538 268 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 PDHA1P08559 390 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 KRT10P13645 584 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 JUPP14923 745 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 HK3P52790 923 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 PPIDQ08752 370 aaKnown RBP19.54■□□□□ 0.72
SREBF1-220ENST00000581707 C1orf61Q13536 156 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 IHHQ14623 411 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 ALG11Q2TAA5 492 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 DEFB133Q30KQ1 61 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 DENND2CQ68D51 928 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 ZCCHC8Q6NZY4 707 aaKnown RBP19.54■□□□□ 0.72
SREBF1-220ENST00000581707 MFSD7Q6UXD7 560 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 USP45Q70EL2 814 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 RFX6Q8HWS3 928 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 TMTC1Q8IUR5 882 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 HID1Q8IV36 788 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 NDUFAF2Q8N183 169 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 CBARPQ8N350 705 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-220ENST00000581707 ATL2Q8NHH9 583 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 ARRDC2Q8TBH0 407 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 WDR92Q96MX6 357 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 MCCC1Q96RQ3 725 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-220ENST00000581707 IL12RB2Q99665 862 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 LRRC61Q9BV99 259 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 USP29Q9HBJ7 922 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 EVA1BQ9NVM1 165 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 TFR2Q9UP52 801 aa19.54■□□□□ 0.72
SREBF1-220ENST00000581707 EPN1Q9Y6I3 576 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-220ENST00000581707 A0A0A6YYK5 440 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-220ENST00000581707 NPIPB15A6NHN6 443 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-220ENST00000581707 SOWAHDA6NJG2 315 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 LMO7DNF2Z398 122 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 KCNK1O00180 336 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 PSTPIP1O43586 416 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 RASGRP1O95267 797 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 MYF5P13349 255 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 CTPS1P17812 591 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 CA4P22748 312 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 FECHP22830 423 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 LHCGRP22888 699 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 HNF1BP35680 557 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 TRIM23P36406 574 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 DUSP3P51452 185 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-220ENST00000581707 CLDN6P56747 220 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 E2F1Q01094 437 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 NIPAL4Q0D2K0 466 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 ARHGEF7Q14155 803 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 PDK1Q15118 436 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 PTPRRQ15256 657 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 HES3Q5TGS1 186 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 PNCKQ6P2M8 343 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 NPNTQ6UXI9 565 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 GOLPH3Q9H4A6 298 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 KCTD5Q9NXV2 234 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 NCKIPSDQ9NZQ3 722 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 KLQ9UEF7 1012 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 SALL4Q9UJQ4 1053 aa19.53■□□□□ 0.72
SREBF1-220ENST00000581707 DMXL2Q8TDJ6 3036 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 FREM2Q5SZK8 3169 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 LY6G6EA0A0G2JKS1 128 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 PSMD11O00231 422 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 CACNB4O00305 520 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-220ENST00000581707 NDUFA10O95299 355 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 CAPNS1P04632 268 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 ANXA6P08133 673 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 HOXC4P09017 264 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-220ENST00000581707 ALPIP09923 528 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 CTSEP14091 401 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 TSHRP16473 764 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 EPHB1P54762 984 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 KIAA1024LP59773 190 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 SRP54P61011 504 aaKnown RBP19.52■□□□□ 0.72
SREBF1-220ENST00000581707 DYNLT1P63172 113 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 IFI35P80217 286 aaPredicted RBP19.52■□□□□ 0.72
SREBF1-220ENST00000581707 AP1B1Q10567 949 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 ESRP1Q6NXG1 681 aaKnown RBP19.52■□□□□ 0.72
SREBF1-220ENST00000581707 RD3Q7Z3Z2 195 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 HSD11B1LQ7Z5J1 315 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 TSPAN33Q86UF1 283 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 FUBP1Q96AE4 644 aaKnown RBP19.52■□□□□ 0.72
SREBF1-220ENST00000581707 NUS1Q96E22 293 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 CLPBQ9H078 707 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 CHKBQ9Y259 395 aa19.52■□□□□ 0.72
SREBF1-220ENST00000581707 U3KQA8 63 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms