RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 SLC8A1P32418 973 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 PSMD8P48556 350 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 ATXN3P54252 364 aaPredicted RBP12.21□□□□□ -0.45
CCDC84-209ENST00000580556 WNT3AP56704 352 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 POLR2LP62875 67 aaKnown RBP12.21□□□□□ -0.45
CCDC84-209ENST00000580556 CDK16Q00536 496 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 TRAF2Q12933 501 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 GPS1Q13098 491 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 GLE1Q53GS7 698 aaKnown RBP12.21□□□□□ -0.45
CCDC84-209ENST00000580556 ARMC12Q5T9G4 340 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 LYSMD4Q5XG99 296 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 KCTD11Q693B1 232 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 CAMK1DQ8IU85 385 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 MINDY1Q8N5J2 469 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 SPATA22Q8NHS9 363 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 HMGB4Q8WW32 186 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 KLHL32Q96NJ5 620 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 TRIB3Q96RU7 358 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 MLPHQ9BV36 600 aaPredicted RBP12.21□□□□□ -0.45
CCDC84-209ENST00000580556 ADGRE3Q9BY15 652 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 CCDC86Q9H6F5 360 aaKnown RBP12.21□□□□□ -0.45
CCDC84-209ENST00000580556 LRRC40Q9H9A6 602 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 DYRK4Q9NR20 520 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 RAB6BQ9NRW1 208 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 USP36Q9P275 1121 aaKnown RBP12.21□□□□□ -0.45
CCDC84-209ENST00000580556 FZD4Q9ULV1 537 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 SLC6A14Q9UN76 642 aa12.21□□□□□ -0.45
CCDC84-209ENST00000580556 MYO18AQ92614 2054 aaKnown RBP12.21□□□□□ -0.45
CCDC84-209ENST00000580556 APC2O95996 2303 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 ASH1LQ9NR48 2969 aaKnown RBP12.2□□□□□ -0.46
CCDC84-209ENST00000580556 LOC285095A0A1B0GVY8 99 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 TTC24A2A3L6 582 aaPredicted RBP12.2□□□□□ -0.46
CCDC84-209ENST00000580556 C16orf96A6NNT2 1141 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 MID1O15344 667 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 TTI1O43156 1089 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 RAD51CO43502 376 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 SUN1O94901 812 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 FTH1P19P0C7X4 201 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 HLA-DPA1P20036 260 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 TPSB2P20231 275 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 NFKBIAP25963 317 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 ADRA1AP35348 466 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 DRD3P35462 400 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 TNNT3P45378 269 aaPredicted RBP12.2□□□□□ -0.46
CCDC84-209ENST00000580556 GRIA4P48058 902 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 CDK18Q07002 472 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 TPSAB1Q15661 275 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 ZNF423Q2M1K9 1284 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 CFAP58Q5T655 872 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 PEAR1Q5VY43 1037 aaPredicted RBP12.2□□□□□ -0.46
CCDC84-209ENST00000580556 C8orf74Q6P047 294 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 CCNI2Q6ZMN8 369 aaPredicted RBP12.2□□□□□ -0.46
CCDC84-209ENST00000580556 ERN2Q76MJ5 926 aaKnown RBP12.2□□□□□ -0.46
CCDC84-209ENST00000580556 PARS2Q7L3T8 475 aaKnown RBP12.2□□□□□ -0.46
CCDC84-209ENST00000580556 PRUNE1Q86TP1 453 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 MARCH9Q86YJ5 346 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 AADATQ8N5Z0 425 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 NOA1Q8NC60 698 aaKnown RBP12.2□□□□□ -0.46
CCDC84-209ENST00000580556 RAB7BQ96AH8 199 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 MRGPRX2Q96LB1 330 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 CARD6Q9BX69 1037 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 FSD1LQ9BXM9 530 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 RAB17Q9H0T7 212 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 ETNK1Q9HBU6 452 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 CAPN10Q9HC96 672 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 ITM2CQ9NQX7 267 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 BCCIPQ9P287 314 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC84-209ENST00000580556 ASIC3Q9UHC3 531 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 PPIL1Q9Y3C6 166 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 PCDHGC4Q9Y5F7 938 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 ASXL3Q9C0F0 2248 aa12.2□□□□□ -0.46
CCDC84-209ENST00000580556 PLXND1Q9Y4D7 1925 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 HELZ2Q9BYK8 2649 aaKnown RBP12.19□□□□□ -0.46
CCDC84-209ENST00000580556 ACACAQ13085 2346 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 EIF4E1BA6NMX2 242 aaKnown RBP12.19□□□□□ -0.46
CCDC84-209ENST00000580556 E7EVH7 732 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 SMAPO00193 183 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 AP1G1O43747 822 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 ZNF217O75362 1048 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 PMPCBO75439 489 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 NDST3O95803 873 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 CPP00450 1065 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 PRLP01236 227 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 FGF1P05230 155 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 ACADMP11310 421 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 ADRB3P13945 408 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 IVDP26440 423 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 ADCY8P40145 1251 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 NEK3P51956 506 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 TUBB4BP68371 445 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 KCNJ11Q14654 390 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 TRIP13Q15645 432 aaPredicted RBP12.19□□□□□ -0.46
CCDC84-209ENST00000580556 TRIP6Q15654 476 aaKnown RBP12.19□□□□□ -0.46
CCDC84-209ENST00000580556 UGP2Q16851 508 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 DUOXA1Q1HG43 343 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 PIP5KL1Q5T9C9 394 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 AGBL4Q5VU57 503 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 NAPEPLDQ6IQ20 393 aa12.19□□□□□ -0.46
CCDC84-209ENST00000580556 KIAA1324Q6UXG2 1013 aaKnown RBP12.19□□□□□ -0.46
CCDC84-209ENST00000580556 RANBP10Q6VN20 620 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms