RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 ACSS2Q9NR19 701 aa11.08□□□□□ -0.64
GGA3-206ENST00000578773 ST7Q9NRC1 585 aa11.08□□□□□ -0.64
GGA3-206ENST00000578773 RAB20Q9NX57 234 aa11.08□□□□□ -0.64
GGA3-206ENST00000578773 COPG2Q9UBF2 871 aa11.08□□□□□ -0.64
GGA3-206ENST00000578773 PCDHGA6Q9Y5G7 932 aa11.08□□□□□ -0.64
GGA3-206ENST00000578773 NSD1Q96L73 2696 aaPredicted RBP11.08□□□□□ -0.64
GGA3-206ENST00000578773 FLNAP21333 2647 aaKnown RBP11.07□□□□□ -0.64
GGA3-206ENST00000578773 FBN1P35555 2871 aaKnown RBP11.07□□□□□ -0.64
GGA3-206ENST00000578773 E5RJQ4 531 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 ZNF185O15231 689 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 GRAP2O75791 330 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 PDIA4P13667 645 aaKnown RBP11.07□□□□□ -0.64
GGA3-206ENST00000578773 ITGA3P26006 1051 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 CCR1P32246 355 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 PTGER4P35408 488 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 RPL34P49207 117 aaKnown RBP11.07□□□□□ -0.64
GGA3-206ENST00000578773 PPM1FP49593 454 aaPredicted RBP11.07□□□□□ -0.64
GGA3-206ENST00000578773 MXI1P50539 228 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 SRSF11Q05519 484 aaKnown RBP11.07□□□□□ -0.64
GGA3-206ENST00000578773 FOXM1Q08050 763 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 NME3Q13232 169 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 MTM1Q13496 603 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 UGT8Q16880 541 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 ANO6Q4KMQ2 910 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 KRT39Q6A163 491 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 BRAPQ7Z569 592 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 ZSWIM9Q86XI8 627 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 IQCKQ8N0W5 287 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 DEFB106AQ8N104 65 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 GLIS1Q8NBF1 620 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 FBXL13Q8NEE6 735 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 TMEM174Q8WUU8 243 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 STAMBPL1Q96FJ0 436 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 HSFY1Q96LI6 401 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 ZPBPQ9BS86 351 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 TMUB1Q9BVT8 246 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 CARS2Q9HA77 564 aaKnown RBP11.07□□□□□ -0.64
GGA3-206ENST00000578773 POPDC2Q9HBU9 364 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 ATP13A1Q9HD20 1204 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 SLC12A6Q9UHW9 1150 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 FRMD4BQ9Y2L6 1034 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 NBEAL1Q6ZS30 2694 aa11.07□□□□□ -0.64
GGA3-206ENST00000578773 NCOA6Q14686 2063 aaPredicted RBP11.07□□□□□ -0.64
GGA3-206ENST00000578773 NUP210LQ5VU65 1888 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 PIGNO95427 931 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 DRD2P14416 443 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 MAPK9P45984 424 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 LIG3P49916 1009 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 GFERP55789 205 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 BIRC2Q13490 618 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 MYLK3Q32MK0 819 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 DUS1LQ6P1R4 473 aaKnown RBP11.06□□□□□ -0.64
GGA3-206ENST00000578773 TMEM270Q6UE05 265 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 GDPD4Q6W3E5 623 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 LYSMD3Q7Z3D4 306 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 TTC39CQ8N584 583 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 UBE2Q2Q8WVN8 375 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 ITLN2Q8WWU7 325 aaPredicted RBP11.06□□□□□ -0.64
GGA3-206ENST00000578773 NCSTNQ92542 709 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 USP28Q96RU2 1077 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 BARD1Q99728 777 aaKnown RBP11.06□□□□□ -0.64
GGA3-206ENST00000578773 PCDH12Q9NPG4 1184 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 SERTAD1Q9UHV2 236 aa11.06□□□□□ -0.64
GGA3-206ENST00000578773 C19orf84I3L1E1 186 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 PDXKO00764 312 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 TEX33O43247 280 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 BUB1BO60566 1050 aaPredicted RBP11.05□□□□□ -0.64
GGA3-206ENST00000578773 NDUFA10O95299 355 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 F9P00740 461 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 COX6B1P14854 86 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 NR2F2P24468 414 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 OR1E1P30953 314 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 GPD2P43304 727 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 GNPDA1P46926 289 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 POLD2P49005 469 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 YWHAZP63104 245 aaKnown RBP11.05□□□□□ -0.64
GGA3-206ENST00000578773 CTBSQ01459 385 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 CNGA2Q16280 664 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 SMTNL2Q2TAL5 461 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 INTS8Q75QN2 995 aaKnown RBP11.05□□□□□ -0.64
GGA3-206ENST00000578773 BEND5Q7L4P6 421 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 SETD3Q86TU7 594 aaPredicted RBP11.05□□□□□ -0.64
GGA3-206ENST00000578773 DRC7Q8IY82 874 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 ST6GALNAC3Q8NDV1 305 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 OR2AP1Q8NGE2 309 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 ATL2Q8NHH9 583 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 SLC37A2Q8TED4 501 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 ARHGEF26Q96DR7 871 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 SLC2A13Q96QE2 648 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 RUBCNLQ9H714 662 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 LATS2Q9NRM7 1088 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 PIGVQ9NUD9 493 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 LNPEPQ9UIQ6 1025 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 CSAG2Q9Y5P2 127 aa11.05□□□□□ -0.64
GGA3-206ENST00000578773 COPG1Q9Y678 874 aaKnown RBP11.05□□□□□ -0.64
GGA3-206ENST00000578773 DRGXA6NNA5 263 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 CACNB4O00305 520 aaPredicted RBP11.04□□□□□ -0.64
GGA3-206ENST00000578773 CEACAM5P06731 702 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 BPIP17213 487 aa11.04□□□□□ -0.64
GGA3-206ENST00000578773 GTF2H1P32780 548 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms