RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 GIPC1O14908 333 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 FLRT2O43155 660 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 CBFA2T3O75081 653 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 RECQL5O94762 991 aaPredicted RBP19.38■□□□□ 0.69
SS18-208ENST00000577751 HEXIM1O94992 359 aaKnown RBP19.38■□□□□ 0.69
SS18-208ENST00000577751 TRBC1P01850 177 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 LHCGRP22888 699 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 CD68P34810 354 aaPredicted RBP19.38■□□□□ 0.69
SS18-208ENST00000577751 HNF1BP35680 557 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 YPEL5P62699 121 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 IL9RQ01113 521 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 OTUD4Q01804 1114 aaKnown RBP19.38■□□□□ 0.69
SS18-208ENST00000577751 KLF1Q13351 362 aaPredicted RBP19.38■□□□□ 0.69
SS18-208ENST00000577751 PTPRRQ15256 657 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 IRF4Q15306 451 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 SLC14A2Q15849 920 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 CNGA3Q16281 694 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 CCDC181Q5TID7 509 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 USP45Q70EL2 814 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 KANSL1Q7Z3B3 1105 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 NDUFAF2Q8N183 169 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 HTR3CQ8WXA8 447 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 COQ10AQ96MF6 247 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 RBM15Q96T37 977 aaKnown RBP eCLIP19.38■□□□□ 0.69
SS18-208ENST00000577751 LZTFL1Q9NQ48 299 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 PCOLCE2Q9UKZ9 415 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 PPP2R2CQ9Y2T4 447 aa19.38■□□□□ 0.69
SS18-208ENST00000577751 PSMD11O00231 422 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 ALPIP09923 528 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 CTPS1P17812 591 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 EPHA8P29322 1005 aaPredicted RBP19.37■□□□□ 0.69
SS18-208ENST00000577751 BNIP3Q12983 259 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 FZD2Q14332 565 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 TPRG1LQ5T0D9 272 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 MEI1Q5TIA1 1274 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 TSPAN33Q86UF1 283 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 BAHD1Q8TBE0 780 aaPredicted RBP19.37■□□□□ 0.69
SS18-208ENST00000577751 PDLIM2Q96JY6 352 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 SMIM14Q96QK8 99 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 TRIB3Q96RU7 358 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 LYSMD1Q96S90 227 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 BTBD3Q9Y2F9 522 aa19.37■□□□□ 0.69
SS18-208ENST00000577751 ANKRD66B4E2M5 251 aa19.36■□□□□ 0.69
SS18-208ENST00000577751 H7C0C1 242 aa19.36■□□□□ 0.69
SS18-208ENST00000577751 RBL1P28749 1068 aa19.36■□□□□ 0.69
SS18-208ENST00000577751 ATP5OP48047 213 aa19.36■□□□□ 0.69
SS18-208ENST00000577751 EPHB1P54762 984 aa19.36■□□□□ 0.69
SS18-208ENST00000577751 PDE1CQ14123 709 aaPredicted RBP19.36■□□□□ 0.69
SS18-208ENST00000577751 CRTC1Q6UUV9 634 aa19.36■□□□□ 0.69
SS18-208ENST00000577751 GATAD2AQ86YP4 633 aa19.36■□□□□ 0.69
SS18-208ENST00000577751 ZNF567Q8N184 647 aa19.36■□□□□ 0.69
SS18-208ENST00000577751 SETD7Q8WTS6 366 aaKnown RBP19.36■□□□□ 0.69
SS18-208ENST00000577751 KCTD5Q9NXV2 234 aa19.36■□□□□ 0.69
SS18-208ENST00000577751 COL5A1P20908 1838 aaPredicted RBP19.35■□□□□ 0.69
SS18-208ENST00000577751 CAPN8A6NHC0 703 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 MT-CYBP00156 380 aaPredicted RBP19.35■□□□□ 0.69
SS18-208ENST00000577751 RBP3P10745 1247 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 GRK6P43250 576 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 EIF3EP60228 445 aaKnown RBP19.35■□□□□ 0.69
SS18-208ENST00000577751 PTSQ03393 145 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 MTM1Q13496 603 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 INPP5AQ14642 412 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 ACOX1Q15067 660 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 CDKN3Q16667 212 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 QPCTQ16769 361 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 PID1Q7Z2X4 250 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 HSD11B1LQ7Z5J1 315 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 GLRX5Q86SX6 157 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 TTC13Q8NBP0 860 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 PLA2G15Q8NCC3 412 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 LPCAT1Q8NF37 534 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 SPATA22Q8NHS9 363 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 RHBDD1Q8TEB9 315 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 FCRL5Q96RD9 977 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 ADGRE3Q9BY15 652 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 C10orf88Q9H8K7 445 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 TRHDEQ9UKU6 1024 aa19.35■□□□□ 0.69
SS18-208ENST00000577751 TDRD6O60522 2096 aaKnown RBP19.35■□□□□ 0.69
SS18-208ENST00000577751 A0A0U1RQS6 177 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 MED19A0JLT2 244 aaPredicted RBP19.34■□□□□ 0.69
SS18-208ENST00000577751 CSF2P04141 144 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 ITGAVP06756 1048 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 ZNF30P17039 623 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 NFKB1P19838 968 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 TRIM23P36406 574 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 CDK18Q07002 472 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 ARHGEF7Q14155 803 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 PTK2BQ14289 1009 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 N4BP2L1Q5TBK1 243 aaPredicted RBP19.34■□□□□ 0.69
SS18-208ENST00000577751 ESRP1Q6NXG1 681 aaKnown RBP19.34■□□□□ 0.69
SS18-208ENST00000577751 TECPR1Q7Z6L1 1165 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 PARGQ86W56 976 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 CDKL3Q8IVW4 592 aaPredicted RBP19.34■□□□□ 0.69
SS18-208ENST00000577751 RAVER1Q8IY67 606 aaKnown RBP19.34■□□□□ 0.69
SS18-208ENST00000577751 TRIM58Q8NG06 486 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 DTD2Q96FN9 168 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 ALS2CR12Q96Q35 445 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 APOOQ9BUR5 198 aa19.34■□□□□ 0.69
SS18-208ENST00000577751 MLPHQ9BV36 600 aaPredicted RBP19.34■□□□□ 0.69
SS18-208ENST00000577751 KCNF1Q9H3M0 494 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms