RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 DTX3LQ8TDB6 740 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 MFSD3Q96ES6 412 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 PGM2Q96G03 612 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 FCRL3Q96P31 734 aaPredicted RBP15.32■□□□□ 0.04
SS18-206ENST00000577572 SH3GL2Q99962 352 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 DHRS4Q9BTZ2 278 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 ZFYVE1Q9HBF4 777 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 DYRK4Q9NR20 520 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 ARHGEF3Q9NR81 526 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 ZNF180Q9UJW8 692 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 PKP3Q9Y446 797 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 ZNF711Q9Y462 761 aa15.32■□□□□ 0.04
SS18-206ENST00000577572 XIRP2A4UGR9 3374 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 SHISA7A6NL88 538 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 C16orf96A6NNT2 1141 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 CHURC1-FNTBB4DL54 471 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 PSMD11O00231 422 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 ATG13O75143 517 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 RPP40O75818 363 aaKnown RBP15.31■□□□□ 0.04
SS18-206ENST00000577572 MYZAPP0CAP1 466 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 HLA-EP13747 358 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 TIMP2P16035 220 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 XPAP23025 273 aaPredicted RBP15.31■□□□□ 0.04
SS18-206ENST00000577572 NMBRP28336 390 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 ATP5DP30049 168 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 SLC8A1P32418 973 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 TIE1P35590 1138 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 HNF1BP35680 557 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 CDKN3Q16667 212 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 LGSNQ5TDP6 509 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 EMC10Q5UCC4 262 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 MARK2Q7KZI7 788 aaKnown RBP15.31■□□□□ 0.04
SS18-206ENST00000577572 TTC30BQ8N4P2 665 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 SLC44A1Q8WWI5 657 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 ACOX2Q99424 681 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 FAM167BQ9BTA0 163 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 OSBPL6Q9BZF3 934 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 GPR63Q9BZJ6 419 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 MFSD1Q9H3U5 465 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 PRDM6Q9NQX0 595 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 IL17CQ9P0M4 197 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 LGALS13Q9UHV8 139 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 SPO11Q9Y5K1 396 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 IKBKGQ9Y6K9 419 aa15.31■□□□□ 0.04
SS18-206ENST00000577572 AGPSO00116 658 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 KPNA3O00505 521 aaPredicted RBP15.3■□□□□ 0.04
SS18-206ENST00000577572 STX7O15400 261 aaKnown RBP15.3■□□□□ 0.04
SS18-206ENST00000577572 SHBGP04278 402 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 BMP1P13497 986 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 VIPR1P32241 457 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 ABL2P42684 1182 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 MSH2P43246 934 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 ARCN1P48444 511 aaKnown RBP15.3■□□□□ 0.04
SS18-206ENST00000577572 SERPINB9P50453 376 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 NEK3P51956 506 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 PRAMEP78395 509 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 DNAJC3Q13217 504 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 CNGA3Q16281 694 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 KBTBD12Q3ZCT8 623 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 HSP90B2PQ58FF3 399 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 CEP85LQ5SZL2 805 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 ZNF776Q68DI1 518 aaPredicted RBP15.3■□□□□ 0.04
SS18-206ENST00000577572 ESRP1Q6NXG1 681 aaKnown RBP15.3■□□□□ 0.04
SS18-206ENST00000577572 TAOK1Q7L7X3 1001 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 TTC7BQ86TV6 843 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 ZSWIM9Q86XI8 627 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 ZNF687Q8N1G0 1237 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 MDGA1Q8NFP4 955 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 OR13J1Q8NGT2 312 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 GPR150Q8NGU9 434 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 ASB2Q96Q27 587 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 CPNE1Q99829 537 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 C20orf96Q9NUD7 363 aaPredicted RBP15.3■□□□□ 0.04
SS18-206ENST00000577572 KCTD5Q9NXV2 234 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 ZFATQ9P243 1243 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 NFKBIL1Q9UBC1 381 aaPredicted RBP15.3■□□□□ 0.04
SS18-206ENST00000577572 APPL1Q9UKG1 709 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 MMP17Q9ULZ9 603 aa15.3■□□□□ 0.04
SS18-206ENST00000577572 F5P12259 2224 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 PFDN6O15212 129 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 AP1G1O43747 822 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 VAPBO95292 243 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 KLF8O95600 359 aaPredicted RBP15.29■□□□□ 0.04
SS18-206ENST00000577572 IL1BP01584 269 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 INHBAP08476 426 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 CHRNB1P11230 501 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 HOXB2P14652 356 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 SATB1Q01826 763 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 THOC5Q13769 683 aaKnown RBP15.29■□□□□ 0.04
SS18-206ENST00000577572 ARHGEF7Q14155 803 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 CST6Q15828 149 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 KRT71Q3SY84 523 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 C2orf27AQ580R0 203 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 NEPROQ6NW34 567 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 FBXL19Q6PCT2 694 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 TRMT10BQ6PF06 316 aaKnown RBP15.29■□□□□ 0.04
SS18-206ENST00000577572 ADGRD1Q6QNK2 874 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 AFTPHQ6ULP2 937 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 CRTC1Q6UUV9 634 aa15.29■□□□□ 0.04
SS18-206ENST00000577572 ERN2Q76MJ5 926 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms