RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ABCB7O75027 752 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 PTPN3P26045 913 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 HTR1BP28222 390 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 LEPRP48357 1165 aaKnown RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 TRIM32Q13049 653 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 TARBP2Q15633 366 aaKnown RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 IMPG1Q17R60 797 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 PYCR3Q53H96 274 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 HACD2Q6Y1H2 254 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 PARP8Q8N3A8 854 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 C7orf31Q8N865 590 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 NDRG1Q92597 394 aaKnown RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 FKBP10Q96AY3 582 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 ROPN1LQ96C74 230 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 CDHR1Q96JP9 859 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 ZMAT2Q96NC0 199 aaKnown RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 C11orf84Q9BUA3 381 aaPredicted RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 YTHDF1Q9BYJ9 559 aaKnown RBP14.46□□□□□ -0.09
SMG6-215ENST00000574501 CDT1Q9H211 546 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 CYP3A43Q9HB55 503 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 PTPRHQ9HD43 1115 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 SCUBE2Q9NQ36 999 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 ACTR3BQ9P1U1 418 aa14.46□□□□□ -0.09
SMG6-215ENST00000574501 FAM95CA0A1B0GW59 222 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 TTC24A2A3L6 582 aaPredicted RBP14.45□□□□□ -0.1
SMG6-215ENST00000574501 MAN1A2O60476 641 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 ALOX5P09917 674 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 STMN1P16949 149 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 BDNFP23560 247 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 NR4A2P43354 598 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 ARCN1P48444 511 aaKnown RBP14.45□□□□□ -0.1
SMG6-215ENST00000574501 APLP1P51693 650 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 TUBA3CQ13748 450 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 FRG1Q14331 258 aaKnown RBP14.45□□□□□ -0.1
SMG6-215ENST00000574501 CSHL1Q14406 222 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 LCN8Q6JVE9 175 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 SLC16A12Q6ZSM3 486 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 SLC22A16Q86VW1 577 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 SPARTQ8N0X7 666 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 CLIP4Q8N3C7 705 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 ZNF280CQ8ND82 737 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 SLC35F5Q8WV83 523 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 CENPIQ92674 756 aaPredicted RBP14.45□□□□□ -0.1
SMG6-215ENST00000574501 CAMKK2Q96RR4 588 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 MLPHQ9BV36 600 aaPredicted RBP14.45□□□□□ -0.1
SMG6-215ENST00000574501 WDR12Q9GZL7 423 aaKnown RBP14.45□□□□□ -0.1
SMG6-215ENST00000574501 PIF1Q9H611 641 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.45□□□□□ -0.1
SMG6-215ENST00000574501 MAGED1Q9Y5V3 778 aaPredicted RBP14.45□□□□□ -0.1
SMG6-215ENST00000574501 MAFO75444 373 aaPredicted RBP14.45□□□□□ -0.1
SMG6-215ENST00000574501 C7P10643 843 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 CAPN3P20807 821 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 GPX3P22352 226 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 HADHAP40939 763 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 STX1BP61266 288 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 ADAM17P78536 824 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 FAM83EQ2M2I3 478 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 PAGE2BQ5JRK9 111 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 CYHR1Q6ZMK1 362 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 DNAJB14Q8TBM8 379 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 RNF139Q8WU17 664 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 OTUD5Q96G74 571 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 ELMO2Q96JJ3 720 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 RHOBTB2Q9BYZ6 727 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 NRBP2Q9NSY0 501 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 ABCD2Q9UBJ2 740 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 GTF2IRD1Q9UHL9 959 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 PTGDR2Q9Y5Y4 395 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 ANK1P16157 1881 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 UBR3Q6ZT12 1888 aa14.45□□□□□ -0.1
SMG6-215ENST00000574501 SLC6A2P23975 617 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 ATP5F1P24539 256 aaPredicted RBP14.44□□□□□ -0.1
SMG6-215ENST00000574501 ALDH4A1P30038 563 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 BAG6P46379 1132 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 LSM3P62310 102 aaKnown RBP14.44□□□□□ -0.1
SMG6-215ENST00000574501 PITX1P78337 314 aaPredicted RBP14.44□□□□□ -0.1
SMG6-215ENST00000574501 IFITM2Q01629 132 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 ARL13BQ3SXY8 428 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 FUT11Q495W5 492 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 PLEKHG7Q6ZR37 379 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 LARP4Q71RC2 724 aaKnown RBP eCLIP14.44□□□□□ -0.1
SMG6-215ENST00000574501 DNERQ8NFT8 737 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 MINDY3Q9H8M7 445 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 ZNF229Q9UJW7 825 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 FZD10Q9ULW2 581 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 USP22Q9UPT9 525 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 FXYD1O00168 92 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 UBFD1O14562 309 aaKnown RBP14.44□□□□□ -0.1
SMG6-215ENST00000574501 ANGPT2O15123 496 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 HCRTO43612 131 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 LDLRP01130 860 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 S100BP04271 92 aaPredicted RBP14.44□□□□□ -0.1
SMG6-215ENST00000574501 UGT2B4P06133 528 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 STAG3L1P0CL83 205 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 HSD17B1P14061 328 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 CES1P23141 567 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 CRHBPP24387 322 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 CD68P34810 354 aaPredicted RBP14.44□□□□□ -0.1
SMG6-215ENST00000574501 TAS2R39P59534 338 aa14.44□□□□□ -0.1
SMG6-215ENST00000574501 INCA1Q0VD86 236 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms