RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 USP29Q9HBJ7 922 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 TMEM9BQ9NQ34 198 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 TTC7AQ9ULT0 858 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 SNX12Q9UMY4 172 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 ANKRD6Q9Y2G4 727 aa12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 R3HDM2Q9Y2K5 976 aaKnown RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.81□□□□□ -0.36
TRAPPC1-206ENST00000573989 PCDH15Q96QU1 1955 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 GOLGA6L10A0A0M3HER8 536 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 A0A1B0GVT2 93 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 CTAGE9A4FU28 777 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 CAPN8A6NHC0 703 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 A8MX80 341 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 TLR4O00206 839 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 PSMD3O43242 534 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 GCATO75600 419 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 HEXIM1O94992 359 aaKnown RBP12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 NDST3O95803 873 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 PRLP01236 227 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 ITGAVP06756 1048 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 CTPS1P17812 591 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 HNF1BP35680 557 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 RABIFP47224 123 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 RALGDSQ12967 914 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 GRIK2Q13002 908 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 SNX1Q13596 522 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 LRRC14Q15048 493 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 GSTA5Q7RTV2 222 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 KDELC2Q7Z4H8 507 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 PTAR1Q7Z6K3 402 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 RAVER1Q8IY67 606 aaKnown RBP12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 OXR1Q8N573 874 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 CCDC110Q8TBZ0 833 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 NETO1Q8TDF5 533 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 ACTRT1Q8TDG2 376 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 ATG4AQ8WYN0 398 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 LYSMD1Q96S90 227 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 MYOCQ99972 504 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 FZD3Q9NPG1 666 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 GDF3Q9NR23 364 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 UBP1Q9NZI7 540 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 DRG1Q9Y295 367 aaKnown RBP12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 KNL1Q8NG31 2342 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 ZNF292O60281 2723 aa12.8□□□□□ -0.36
TRAPPC1-206ENST00000573989 TMEM131Q92545 1883 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 A0A1W2PR77 199 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 NPIPB15A6NHN6 443 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 RECQL5O94762 991 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 IFNB1P01574 187 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 ALPIP09923 528 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 THEGLP0DJG4 465 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 HLA-DPA1P20036 260 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 PSMB4P28070 264 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 LIMK1P53667 647 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 WNT3AP56704 352 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 SEMG2Q02383 582 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 PTK2BQ14289 1009 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 FGL2Q14314 439 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 GALNT3Q14435 633 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 OASLQ15646 514 aaKnown RBP12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 CNGA3Q16281 694 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 QPCTQ16769 361 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 PARP6Q2NL67 630 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 HS1BP3Q53T59 392 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 DENND2CQ68D51 928 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 C4orf22Q6V702 233 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 KYAT3Q6YP21 454 aaKnown RBP12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 ABI3BPQ7Z7G0 1075 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 IPMKQ8NFU5 416 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 CENPTQ96BT3 561 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 RTP4Q96DX8 246 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 TRIB3Q96RU7 358 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 KLF6Q99612 283 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 MAGEE1Q9HCI5 957 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 COQ6Q9Y2Z9 468 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 SLCO1B1Q9Y6L6 691 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 FRYLO94915 3013 aa12.79□□□□□ -0.36
TRAPPC1-206ENST00000573989 WDR87Q6ZQQ6 2873 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 C1orf232A0A0U1RR37 186 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 LOC285095A0A1B0GVY8 99 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 F5H423 210 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 WNT9AO14904 365 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 YKT6O15498 198 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 FGF1P05230 155 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 PYGLP06737 847 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 FDFT1P37268 417 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 CTSKP43235 329 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 ARRB1P49407 418 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 THOP1P52888 689 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 YPEL5P62699 121 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 IHHQ14623 411 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 SUZ12Q15022 739 aaKnown RBP12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 SIX1Q15475 284 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 KIF19Q2TAC6 998 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 LRRC66Q68CR7 880 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 CRTC1Q6UUV9 634 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 KDELC1Q6UW63 502 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 GCNT7Q6ZNI0 430 aa12.78□□□□□ -0.36
TRAPPC1-206ENST00000573989 MINDY1Q8N5J2 469 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms