RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 DPPA4Q7L190 304 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 KATNAL2Q8IYT4 538 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 CALR3Q96L12 384 aaKnown RBP25.26■■□□□ 1.63
FANCA-228ENST00000567943 NLGN3Q9NZ94 848 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 ASXL3Q9C0F0 2248 aa25.26■■□□□ 1.63
FANCA-228ENST00000567943 A0A1W2PQ67 120 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 K7ESM1 405 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 KCNK1O00180 336 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 TAF4O00268 1085 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 PJA2O43164 708 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 LZTS3O60299 673 aaPredicted RBP25.25■■□□□ 1.63
FANCA-228ENST00000567943 GCATO75600 419 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 CPP00450 1065 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 THOP1P52888 689 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 DSC2Q02487 901 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 INPP5AQ14642 412 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 PDK1Q15118 436 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 PTPRRQ15256 657 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 TAZQ16635 292 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 KAZNQ674X7 775 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 MACC1Q6ZN28 852 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 GALNT15Q8N3T1 639 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 PLA2G15Q8NCC3 412 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 ZCCHC14Q8WYQ9 949 aaKnown RBP25.25■■□□□ 1.63
FANCA-228ENST00000567943 KRT35Q92764 455 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 DESI2Q9BSY9 194 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 HAUS2Q9NVX0 235 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 B4GALT6Q9UBX8 382 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 AMACRQ9UHK6 382 aa25.25■■□□□ 1.63
FANCA-228ENST00000567943 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.25■■□□□ 1.63
FANCA-228ENST00000567943 RECQL5O94762 991 aaPredicted RBP25.24■■□□□ 1.63
FANCA-228ENST00000567943 ZRANB2O95218 330 aaKnown RBP eCLIP25.24■■□□□ 1.63
FANCA-228ENST00000567943 JCHAINP01591 159 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 HLA-DQB2P05538 268 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 AP1B1Q10567 949 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 TFDP2Q14188 446 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 PTK2BQ14289 1009 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 KCTD16Q68DU8 428 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 CCDC50Q8IVM0 306 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 RCOR2Q8IZ40 523 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 PELI3Q8N2H9 469 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 APOLD1Q96LR9 279 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 OLFM3Q96PB7 478 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 OR1A2Q9Y585 309 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 RAI2Q9Y5P3 530 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 CSNK1G3Q9Y6M4 447 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 PKD1L2Q7Z442 2459 aa25.24■■□□□ 1.63
FANCA-228ENST00000567943 CHD6Q8TD26 2715 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 APC2O95996 2303 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 TOR1BO14657 336 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 PPP1R12AO14974 1030 aaPredicted RBP25.23■■□□□ 1.63
FANCA-228ENST00000567943 AQP9O43315 295 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 CST8O60676 142 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 PGLSO95336 258 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 ELFN1P0C7U0 828 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 ILKQ13418 452 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 TFDP3Q5H9I0 405 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 ARMC12Q5T9G4 340 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 ALG1LQ6GMV1 187 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 TMPRSS12Q86WS5 348 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 PHACTR4Q8IZ21 702 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 CBARPQ8N350 705 aaPredicted RBP25.23■■□□□ 1.63
FANCA-228ENST00000567943 FAM181AQ8N9Y4 354 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 FUBP1Q96AE4 644 aaKnown RBP25.23■■□□□ 1.63
FANCA-228ENST00000567943 RBM41Q96IZ5 413 aaKnown RBP25.23■■□□□ 1.63
FANCA-228ENST00000567943 APOOQ9BUR5 198 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 LRRC61Q9BV99 259 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 SAE1Q9UBE0 346 aaPredicted RBP25.23■■□□□ 1.63
FANCA-228ENST00000567943 PHTF1Q9UMS5 762 aa25.23■■□□□ 1.63
FANCA-228ENST00000567943 NEMP2A6NFY4 417 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 H3BM21 787 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 PCCBP05166 539 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 CKMT1AP12532 417 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 CES1P23141 567 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 PEX5P50542 639 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 IFI35P80217 286 aaPredicted RBP25.22■■□□□ 1.63
FANCA-228ENST00000567943 ZBTB17Q13105 803 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 CNGA3Q16281 694 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 B4GALNT4Q76KP1 1039 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 EXD1Q8NHP7 514 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 ARRDC2Q8TBH0 407 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 KIAA1524Q8TCG1 905 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 LMX1AQ8TE12 382 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 COQ10AQ96MF6 247 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 SMIM14Q96QK8 99 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 IL12RB2Q99665 862 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 CLPBQ9H078 707 aa25.22■■□□□ 1.63
FANCA-228ENST00000567943 APOBEC3BQ9UH17 382 aaKnown RBP25.22■■□□□ 1.63
FANCA-228ENST00000567943 hCG_1818297A0A087WSY0 165 aa25.21■■□□□ 1.63
FANCA-228ENST00000567943 A0A0U1RQJ8 604 aa25.21■■□□□ 1.63
FANCA-228ENST00000567943 FZD6O60353 706 aa25.21■■□□□ 1.63
FANCA-228ENST00000567943 PDHA1P08559 390 aa25.21■■□□□ 1.63
FANCA-228ENST00000567943 CDK4P11802 303 aa25.21■■□□□ 1.63
FANCA-228ENST00000567943 LHCGRP22888 699 aa25.21■■□□□ 1.63
FANCA-228ENST00000567943 CTNNA1P35221 906 aaKnown RBP25.21■■□□□ 1.63
FANCA-228ENST00000567943 NR2C2P49116 596 aa25.21■■□□□ 1.63
FANCA-228ENST00000567943 GSDMDP57764 484 aa25.21■■□□□ 1.63
FANCA-228ENST00000567943 ADCY2Q08462 1091 aa25.21■■□□□ 1.63
FANCA-228ENST00000567943 NIPAL4Q0D2K0 466 aa25.21■■□□□ 1.63
FANCA-228ENST00000567943 KIF5AQ12840 1032 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms