RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 FRYQ5TBA9 3013 aa14.69□□□□□ -0.06
COMMD4-221ENST00000567935 ANKRD11Q6UB99 2663 aaPredicted RBP14.68□□□□□ -0.06
COMMD4-221ENST00000567935 SLC9A3R1O14745 358 aaPredicted RBP14.68□□□□□ -0.06
COMMD4-221ENST00000567935 TPP1O14773 563 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 KIAA0754O94854 1291 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 VAPBO95292 243 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 CRTAMO95727 393 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 WEE1P30291 646 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 CSKP41240 450 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 CSNK1DP48730 415 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 CNGA3Q16281 694 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 FSTL4Q6MZW2 842 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 NEPROQ6NW34 567 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 ZC3HC1Q86WB0 502 aaKnown RBP14.68□□□□□ -0.06
COMMD4-221ENST00000567935 BBS7Q8IWZ6 715 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 C2CD4AQ8NCU7 369 aaPredicted RBP14.68□□□□□ -0.06
COMMD4-221ENST00000567935 STYXQ8WUJ0 223 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 ZNF75CPQ92670 426 aaPredicted RBP14.68□□□□□ -0.06
COMMD4-221ENST00000567935 PTPRN2Q92932 1015 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 VPS39Q96JC1 886 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 TDRD1Q9BXT4 1180 aaKnown RBP14.68□□□□□ -0.06
COMMD4-221ENST00000567935 FOXQ1Q9C009 403 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 NOD2Q9HC29 1040 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 TDP1Q9NUW8 608 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 HACD3Q9P035 362 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 VPS51Q9UID3 782 aa14.68□□□□□ -0.06
COMMD4-221ENST00000567935 CORO1CQ9ULV4 474 aaPredicted RBP14.68□□□□□ -0.06
COMMD4-221ENST00000567935 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.67□□□□□ -0.06
COMMD4-221ENST00000567935 SLC30A4O14863 429 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 EDF1O60869 148 aaKnown RBP14.67□□□□□ -0.06
COMMD4-221ENST00000567935 APOA4P06727 396 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 COL6A2P12110 1019 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 PSMA3P25788 255 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 ARNTP27540 789 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 MZF1P28698 734 aaPredicted RBP14.67□□□□□ -0.06
COMMD4-221ENST00000567935 CD151P48509 253 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 SCNN1BP51168 640 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 RPL26P61254 145 aaKnown RBP14.67□□□□□ -0.06
COMMD4-221ENST00000567935 RHOAP61586 193 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 PDE1CQ14123 709 aaPredicted RBP14.67□□□□□ -0.06
COMMD4-221ENST00000567935 DMC1Q14565 340 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 TEAD2Q15562 447 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 ZNF528Q3MIS6 628 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 CCDC153Q494R4 210 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 TAF1BQ53T94 588 aaPredicted RBP14.67□□□□□ -0.06
COMMD4-221ENST00000567935 ATG16L1Q676U5 607 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 C6orf89Q6UWU4 347 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 SPATA21Q7Z572 469 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 GPR149Q86SP6 731 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 ZNF398Q8TD17 642 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 ZNF778Q96MU6 729 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 TSNARE1Q96NA8 513 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 AGAP2Q99490 1192 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 ELAC2Q9BQ52 826 aaKnown RBP14.67□□□□□ -0.06
COMMD4-221ENST00000567935 C19orf43Q9BQ61 176 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 SLC13A1Q9BZW2 595 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 MANSC1Q9H8J5 431 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 SNX15Q9NRS6 342 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.67□□□□□ -0.06
COMMD4-221ENST00000567935 LHX3Q9UBR4 397 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 RPL26L1Q9UNX3 145 aaKnown RBP14.67□□□□□ -0.06
COMMD4-221ENST00000567935 ARL2BPQ9Y2Y0 163 aa14.67□□□□□ -0.06
COMMD4-221ENST00000567935 MYLKQ15746 1914 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 ZFYVE26Q68DK2 2539 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 LDB2O43679 373 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 MOSPD3O75425 235 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 RFPL2O75678 378 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 NEFHP12036 1026 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 KCNA4P22459 653 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 GLDCP23378 1020 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 CRABP2P29373 138 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 PMLP29590 882 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 CCR2P41597 374 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 PRAMEP78395 509 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 USP4Q13107 963 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 IHHQ14623 411 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 FSCBQ5H9T9 825 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 PRSS36Q5K4E3 855 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 NCEH1Q6PIU2 408 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 FOXR1Q6PIV2 292 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 KDELC2Q7Z4H8 507 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 PJA1Q8NG27 643 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 GPR150Q8NGU9 434 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 NETO1Q8TDF5 533 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 ARHGEF3Q9NR81 526 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 ABCB8Q9NUT2 735 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 SIRPGQ9P1W8 387 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 SLC17A6Q9P2U8 582 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 FBXO5Q9UKT4 447 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 PHTF1Q9UMS5 762 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 PCDHGA2Q9Y5H1 932 aa14.66□□□□□ -0.06
COMMD4-221ENST00000567935 SNAP91O60641 907 aa14.65□□□□□ -0.06
COMMD4-221ENST00000567935 RPP40O75818 363 aaKnown RBP14.65□□□□□ -0.06
COMMD4-221ENST00000567935 TGDSO95455 350 aa14.65□□□□□ -0.06
COMMD4-221ENST00000567935 CD160O95971 181 aa14.65□□□□□ -0.06
COMMD4-221ENST00000567935 PENKP01210 267 aaPredicted RBP14.65□□□□□ -0.06
COMMD4-221ENST00000567935 BPGMP07738 259 aa14.65□□□□□ -0.06
COMMD4-221ENST00000567935 TROVE2P10155 538 aaKnown RBP eCLIP14.65□□□□□ -0.06
COMMD4-221ENST00000567935 SRFP11831 508 aa14.65□□□□□ -0.06
COMMD4-221ENST00000567935 GJA1P17302 382 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms