RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 NAGAP17050 411 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 HOXD13P35453 343 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 ROR2Q01974 943 aaKnown RBP5.73□□□□□ -1.49
LINC00557-201ENST00000563184 KRTAP1-1Q07627 177 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 MMEL1Q495T6 779 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 SPATA1Q5VX52 437 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 PLEKHA7Q6IQ23 1121 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 KLHL35Q6PF15 583 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 DLK2Q6UY11 383 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 GSTA5Q7RTV2 222 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 PRR26Q8N8Z3 221 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 ZNF570Q96NI8 536 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 FCRL4Q96PJ5 515 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 RBM38Q9H0Z9 239 aaKnown RBP5.73□□□□□ -1.49
LINC00557-201ENST00000563184 EBF3Q9H4W6 596 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 IL36RNQ9UBH0 155 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 GPR34Q9UPC5 381 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 STON1Q9Y6Q2 735 aa5.73□□□□□ -1.49
LINC00557-201ENST00000563184 IGHV4-28A0A0C4DH34 117 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 A6NCN8 305 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 TMEM202A6NGA9 273 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 AGAP14A8MT82 685 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 A8MZ25 164 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 WNT9BO14905 357 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 MTA2O94776 668 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 IPO7O95373 1038 aaKnown RBP5.72□□□□□ -1.49
LINC00557-201ENST00000563184 FTCDO95954 541 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 CRYABP02511 175 aaKnown RBP5.72□□□□□ -1.49
LINC00557-201ENST00000563184 CYC1P08574 325 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 KRT10P13645 584 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 ARRB2P32121 409 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 UBA7P41226 1012 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 GARSP41250 739 aaKnown RBP5.72□□□□□ -1.49
LINC00557-201ENST00000563184 NAP1L1P55209 391 aaKnown RBP5.72□□□□□ -1.49
LINC00557-201ENST00000563184 SORDQ00796 357 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 GOLGA8DPQ0D2H9 430 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 NAE1Q13564 534 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 USP41Q3LFD5 358 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 FSCBQ5H9T9 825 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 WDR63Q8IWG1 891 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 CCDC13Q8IYE1 715 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 AADATQ8N5Z0 425 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 SCCPDHQ8NBX0 429 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 ARHGEF26Q96DR7 871 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 C1orf74Q96LT6 269 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 SDF4Q9BRK5 362 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 KCNN2Q9H2S1 579 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 PDZD7Q9H5P4 517 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 FBXO2Q9UK22 296 aaPredicted RBP5.72□□□□□ -1.49
LINC00557-201ENST00000563184 SLC45A1Q9Y2W3 748 aa5.72□□□□□ -1.49
LINC00557-201ENST00000563184 AP3D1O14617 1153 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 LDHCP07864 332 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 PPARGP37231 505 aaPredicted RBP5.71□□□□□ -1.5
LINC00557-201ENST00000563184 CLCN3P51790 818 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 NUDT6P53370 316 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 Q0VFX4 171 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 PRKG2Q13237 762 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 EFNB3Q15768 340 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 CDONQ4KMG0 1287 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 C6orf141Q5SZD1 244 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 SHFQ7M4L6 423 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 AGBL3Q8NEM8 1001 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 SCFD2Q8WU76 684 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 OIT3Q8WWZ8 545 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 ADAMTS14Q8WXS8 1223 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 TIGD1Q96MW7 591 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 CMTM3Q96MX0 182 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 TMEM47Q9BQJ4 181 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 DCLK3Q9C098 648 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 FTOQ9C0B1 505 aaKnown RBP eCLIP5.71□□□□□ -1.5
LINC00557-201ENST00000563184 WDR26Q9H7D7 661 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 FZD10Q9ULW2 581 aa5.71□□□□□ -1.5
LINC00557-201ENST00000563184 A0A1B0GVM2 712 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 DYTNA2CJ06 578 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 BTBD18B2RXH4 712 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 PTGES3LE9PB15 166 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 HSPA12AO43301 675 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 HNRNPCL1O60812 293 aaKnown RBP5.7□□□□□ -1.5
LINC00557-201ENST00000563184 VNN2O95498 520 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 ZNF182P17025 639 aaPredicted RBP5.7□□□□□ -1.5
LINC00557-201ENST00000563184 MXI1P50539 228 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 CLNS1AP54105 237 aaKnown RBP5.7□□□□□ -1.5
LINC00557-201ENST00000563184 KRT24Q2M2I5 525 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 ZNF260Q3ZCT1 412 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 GKAP1Q5VSY0 366 aaPredicted RBP5.7□□□□□ -1.5
LINC00557-201ENST00000563184 SARM1Q6SZW1 724 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 IGSF8Q969P0 613 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 KAT14Q9H8E8 782 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 RANGRFQ9HD47 186 aaPredicted RBP5.7□□□□□ -1.5
LINC00557-201ENST00000563184 HAUS2Q9NVX0 235 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 TERF2IPQ9NYB0 399 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 VPS28Q9UK41 221 aa5.7□□□□□ -1.5
LINC00557-201ENST00000563184 RSF1Q96T23 1441 aaPredicted RBP5.7□□□□□ -1.5
LINC00557-201ENST00000563184 CD8B2A6NJW9 211 aa5.69□□□□□ -1.5
LINC00557-201ENST00000563184 OR6C75A6NL08 312 aa5.69□□□□□ -1.5
LINC00557-201ENST00000563184 MYO1GB0I1T2 1018 aa5.69□□□□□ -1.5
LINC00557-201ENST00000563184 HMGB1P1B2RPK0 211 aaPredicted RBP5.69□□□□□ -1.5
LINC00557-201ENST00000563184 VILLO15195 856 aa5.69□□□□□ -1.5
LINC00557-201ENST00000563184 ASAP2O43150 1006 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms