RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ABI3BPQ7Z7G0 1075 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 NLRP8Q86W28 1048 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 C17orf53Q8N3J3 647 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 ATL2Q8NHH9 583 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 CXorf40AQ8TE69 158 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 TRIM44Q96DX7 344 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 COQ10AQ96MF6 247 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 MLPHQ9BV36 600 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 PARD6AQ9NPB6 346 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 GPR27Q9NS67 375 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 SEMA4GQ9NTN9 838 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 B4GALT6Q9UBX8 382 aa9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 ARHGEF17Q96PE2 2063 aaPredicted RBP9.66□□□□□ -0.86
RABGGTA-221ENST00000561055 GOLGA6CA6NDK9 693 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 GOLGA6BA6NDN3 693 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 ERI2A8K979 691 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 KHNYNO15037 678 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 MAGEC1O60732 1142 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 PHF2O75151 1096 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 PMPCBO75439 489 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 METTL18O95568 372 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 ATXN1LP0C7T5 689 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 ELFN1P0C7U0 828 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 GOLGA6DP0CG33 693 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 C6P13671 934 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 HLA-DPA1P20036 260 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 CD38P28907 300 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 MAT2AP31153 395 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 AKT2P31751 481 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 ACTN2P35609 894 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 FDFT1P37268 417 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 COILP38432 576 aaPredicted RBP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 LIG3P49916 1009 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 EPHB1P54762 984 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 IRX4P78413 519 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 PTSQ03393 145 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 SGCGQ13326 291 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 MSLNQ13421 630 aaPredicted RBP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 PRPSAP1Q14558 356 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 STAT4Q14765 748 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 TEAD4Q15561 434 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 SLC1A5Q15758 541 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 CNGA3Q16281 694 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 LRRC73Q5JTD7 316 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 CCDC70Q6NSX1 233 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 CRTC1Q6UUV9 634 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 ARHGEF18Q6ZSZ5 1173 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 TECPR1Q7Z6L1 1165 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 DCP2Q8IU60 420 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 ZCCHC9Q8N567 271 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 DCLK2Q8N568 766 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 PAF1Q8N7H5 531 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 TP53I13Q8NBR0 393 aaPredicted RBP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 LPCAT1Q8NF37 534 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 SNX19Q92543 992 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 SLCO2A1Q92959 643 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 MAGOHBQ96A72 148 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 RMDN1Q96DB5 314 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 IFT43Q96FT9 208 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 SERAC1Q96JX3 654 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 BMFQ96LC9 184 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 C19orf43Q9BQ61 176 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 WRAP53Q9BUR4 548 aaKnown RBP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 C1QTNF7Q9BXJ2 289 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 ZDHHC5Q9C0B5 715 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 GOLGA6AQ9NYA3 693 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 UBP1Q9NZI7 540 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 PAK5Q9P286 719 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 PCYOX1Q9UHG3 505 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 FEZ2Q9UHY8 353 aaPredicted RBP9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 SLCO1B1Q9Y6L6 691 aa9.65□□□□□ -0.86
RABGGTA-221ENST00000561055 ATXN2Q99700 1313 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 GOLGA6L10A0A0M3HER8 536 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 RGSL1A5PLK6 1076 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 PATE3B3GLJ2 98 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 ARHGAP33O14559 1287 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 WNT9AO14904 365 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 RAD51BO15315 384 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 SLC31A1O15431 190 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 RECQL5O94762 991 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 SUN1O94901 812 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 AP2A1O95782 977 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 WNT1P04628 370 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 PRKCGP05129 697 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 FGF1P05230 155 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 HOXC4P09017 264 aaPredicted RBP9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 ALPIP09923 528 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 CTPS1P17812 591 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 TEAD1P28347 426 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 CASQ1P31415 396 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 RPL22P35268 128 aaKnown RBP9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 TRIM23P36406 574 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 KCNJ1P48048 391 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 FNTAP49354 379 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 STC1P52823 247 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 PFN3P60673 137 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 YPEL5P62699 121 aa9.64□□□□□ -0.87
RABGGTA-221ENST00000561055 BNC1Q01954 994 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms