RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 HEMGNQ9BXL5 484 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 LACRTQ9GZZ8 138 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 CAAP1Q9H8G2 361 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 APOBEC3BQ9UH17 382 aaKnown RBP13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 KLK13Q9UKR3 277 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 DOLKQ9UPQ8 538 aa13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 REXO2Q9Y3B8 237 aaKnown RBP13.01□□□□□ -0.33
CTDSPL2-209ENST00000560620 CFAP69A5D8W1 941 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 NPIPB15A6NHN6 443 aaPredicted RBP13□□□□□ -0.33
CTDSPL2-209ENST00000560620 CACNB4O00305 520 aaPredicted RBP13□□□□□ -0.33
CTDSPL2-209ENST00000560620 AQP9O43315 295 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 SIGLEC6O43699 453 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 CTSEP14091 401 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 NME1P15531 152 aaKnown RBP13□□□□□ -0.33
CTDSPL2-209ENST00000560620 CKMT2P17540 419 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 TGM2P21980 687 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 CTNNA2P26232 953 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 CETN2P41208 172 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 PEX5P50542 639 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 GSDMDP57764 484 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 IFI35P80217 286 aaPredicted RBP13□□□□□ -0.33
CTDSPL2-209ENST00000560620 EIF2B5Q13144 721 aaKnown RBP13□□□□□ -0.33
CTDSPL2-209ENST00000560620 MTM1Q13496 603 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 PTPRRQ15256 657 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 TCEA2Q15560 299 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 CNGA3Q16281 694 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 FAM182AQ5T1J6 154 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 DHRS13Q6UX07 377 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 KDELC2Q7Z4H8 507 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 RAB44Q7Z6P3 723 aaPredicted RBP13□□□□□ -0.33
CTDSPL2-209ENST00000560620 HID1Q8IV36 788 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 PHACTR4Q8IZ21 702 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 RBFAQ8N0V3 343 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 ZNF548Q8NEK5 533 aaPredicted RBP13□□□□□ -0.33
CTDSPL2-209ENST00000560620 OR4C6Q8NH72 309 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 ATL2Q8NHH9 583 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 EXD1Q8NHP7 514 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 TFB1MQ8WVM0 346 aaKnown RBP13□□□□□ -0.33
CTDSPL2-209ENST00000560620 TDRD1Q9BXT4 1180 aaKnown RBP13□□□□□ -0.33
CTDSPL2-209ENST00000560620 BRD8Q9H0E9 1235 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 PCDH9Q9HC56 1237 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 GPR27Q9NS67 375 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 TOR4AQ9NXH8 423 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 SPASTQ9UBP0 616 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 KLQ9UEF7 1012 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 MOSPD1Q9UJG1 213 aa13□□□□□ -0.33
CTDSPL2-209ENST00000560620 hCG_1818297A0A087WSY0 165 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 A0A0U1RQS6 177 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 CCDC66A2RUB6 948 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 BTNL10A8MVZ5 291 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 TRIM38O00635 465 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 SCAMP1O15126 338 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 RFPL3O75679 317 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 HEXIM1O94992 359 aaKnown RBP12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 PECAM1P16284 738 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 CTNNA1P35221 906 aaKnown RBP12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 HNF1BP35680 557 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 ETV3P41162 512 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 BLKP51451 505 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 RWDD2BP57060 319 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 NIPAL4Q0D2K0 466 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 ZNF211Q13398 564 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 C1orf61Q13536 156 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 NFATC4Q14934 902 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 AGERQ15109 404 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 PCSK7Q16549 785 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 DEFB133Q30KQ1 61 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 ALG1LQ6GMV1 187 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 KANSL1Q7Z3B3 1105 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 PEX26Q7Z412 305 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 TSPAN33Q86UF1 283 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 NT5DC3Q86UY8 548 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 TMEM139Q8IV31 216 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 ARRDC2Q8TBH0 407 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 PIH1D2Q8WWB5 315 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 SPOCK2Q92563 424 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 TSACCQ96A04 125 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 OLFM3Q96PB7 478 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 RBM15Q96T37 977 aaKnown RBP eCLIP12.99□□□□□ -0.333e-6■■□□□ 11.8
CTDSPL2-209ENST00000560620 IL12RB2Q99665 862 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 DUSP23Q9BVJ7 150 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 ADGRE3Q9BY15 652 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 TCEAL2Q9H3H9 227 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 WDR26Q9H7D7 661 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 SUDS3Q9H7L9 328 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 KCTD5Q9NXV2 234 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 NLGN3Q9NZ94 848 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 KLF15Q9UIH9 416 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 NEUROG3Q9Y4Z2 214 aa12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 COL5A1P20908 1838 aaPredicted RBP12.99□□□□□ -0.33
CTDSPL2-209ENST00000560620 A0A0J9YYE9 177 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 H7C0C1 242 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 K7ESM1 405 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 PJA2O43164 708 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 RASGRP1O95267 797 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 TRBC1P01850 177 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 ANXA6P08133 673 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 LHCGRP22888 699 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 KELP23276 732 aa12.98□□□□□ -0.33
CTDSPL2-209ENST00000560620 TNNT3P45378 269 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms