RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 CENPNQ96H22 339 aaPredicted RBP10.93□□□□□ -0.66
USP3-206ENST00000558157 FTHL17Q9BXU8 183 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 AGPAT4Q9NRZ5 378 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 TESMINQ9Y4I5 508 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 ANGPTL3Q9Y5C1 460 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 PDCD11Q14690 1871 aaKnown RBP10.93□□□□□ -0.66
USP3-206ENST00000558157 TRIP11Q15643 1979 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 TANC1Q9C0D5 1861 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 G3V2L1 256 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 ABCB7O75027 752 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 GUCY1B2O75343 617 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 MPOP05164 745 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 GSTM2P28161 218 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 CD52P31358 61 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 SERPINB10P48595 397 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 AP3M2P53677 418 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 MLLT10P55197 1068 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 TUBA1BP68363 451 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 NSUN2Q08J23 767 aaKnown RBP eCLIP10.93□□□□□ -0.66
USP3-206ENST00000558157 SLC12A1Q13621 1099 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 SELPLGQ14242 412 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 INPP5AQ14642 412 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 INAVAQ3KP66 663 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 KCNT1Q5JUK3 1230 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 GRTP1Q5TC63 336 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 TWF2Q6IBS0 349 aaKnown RBP10.93□□□□□ -0.66
USP3-206ENST00000558157 FAM45BPQ6NSW5 357 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 TUBA1AQ71U36 451 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 ZNF534Q76KX8 674 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 FAM126BQ8IXS8 530 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 ARFGAP1Q8N6T3 406 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 SPERTQ8NA61 448 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 FAM45AQ8TCE6 357 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 SNX19Q92543 992 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 NACC2Q96BF6 587 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 FAR2Q96K12 515 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 SEZ6LQ9BYH1 1024 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 IL22Q9GZX6 179 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 CRISPLD2Q9H0B8 497 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 CXCL16Q9H2A7 254 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 WDR55Q9H6Y2 383 aaPredicted RBP10.93□□□□□ -0.66
USP3-206ENST00000558157 MARCH7Q9H992 704 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 CNGB3Q9NQW8 809 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 SMPD3Q9NY59 655 aaPredicted RBP10.93□□□□□ -0.66
USP3-206ENST00000558157 IFT80Q9P2H3 777 aaPredicted RBP10.93□□□□□ -0.66
USP3-206ENST00000558157 TXNDC16Q9P2K2 825 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 ST14Q9Y5Y6 855 aa10.93□□□□□ -0.66
USP3-206ENST00000558157 RNF103-CHMP3A0A140T963 221 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 E7ENX8 843 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 PSMD11O00231 422 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 PIK3R2O00459 728 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 TIPRLO75663 272 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 RECQL4O94761 1208 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 TNNC2P02585 160 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 TFEBP19484 476 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 IL10P22301 178 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 FASP25445 335 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 GP5P40197 560 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 ACADSBP45954 432 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 MNX1P50219 401 aaPredicted RBP10.92□□□□□ -0.66
USP3-206ENST00000558157 STX1BP61266 288 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 ILF2Q12905 390 aaKnown RBP10.92□□□□□ -0.66
USP3-206ENST00000558157 BFSP2Q13515 415 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 LRP8Q14114 963 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 DUOXA2Q1HG44 320 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 KIAA1841Q6NSI8 718 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 TRAF7Q6Q0C0 670 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 NAPRTQ6XQN6 538 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 KIAA2013Q8IYS2 634 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 FAM156AQ8NDB6 213 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 ARMC5Q96C12 935 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 NPAS2Q99743 824 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 C17orf80Q9BSJ5 609 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 CALN1Q9BXU9 219 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 PCDHAC1Q9H158 963 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 ATP13A3Q9H7F0 1226 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 OXSMQ9NWU1 459 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 GMIPQ9P107 970 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 TMEM181Q9P2C4 612 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 ENPP5Q9UJA9 477 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 PADI3Q9ULW8 664 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 COPG1Q9Y678 874 aaKnown RBP10.92□□□□□ -0.66
USP3-206ENST00000558157 TRPC5OSA6NMA1 111 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 GRID2O43424 1007 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 DYRK3O43781 588 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 SEC24DO94855 1032 aaPredicted RBP10.92□□□□□ -0.66
USP3-206ENST00000558157 TRUB2O95900 331 aaKnown RBP10.92□□□□□ -0.66
USP3-206ENST00000558157 AKAP5P24588 427 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 ATN1P54259 1190 aaPredicted RBP10.92□□□□□ -0.66
USP3-206ENST00000558157 RAD23AP54725 363 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 NRLP54845 237 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 TMEM132DQ14C87 1099 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 SPATS1Q496A3 300 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 SMG8Q8ND04 991 aaKnown RBP10.92□□□□□ -0.66
USP3-206ENST00000558157 CYGBQ8WWM9 190 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 CPNE1Q99829 537 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 DNAI2Q9GZS0 605 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 RNF39Q9H2S5 420 aa10.92□□□□□ -0.66
USP3-206ENST00000558157 TP63Q9H3D4 680 aaPredicted RBP10.92□□□□□ -0.66
USP3-206ENST00000558157 ASB7Q9H672 318 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms