RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 WDR36Q8NI36 951 aaKnown RBP14.68□□□□□ -0.06
SHMT2-235ENST00000557740 TEKT4Q8WW24 435 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 OR1E3Q8WZA6 343 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 FUBP1Q96AE4 644 aaKnown RBP14.68□□□□□ -0.06
SHMT2-235ENST00000557740 NUS1Q96E22 293 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 GFM1Q96RP9 751 aaKnown RBP14.68□□□□□ -0.06
SHMT2-235ENST00000557740 NUDCD1Q96RS6 583 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 RBM15Q96T37 977 aaKnown RBP eCLIP14.68□□□□□ -0.06
SHMT2-235ENST00000557740 THAP2Q9H0W7 228 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 ETNK2Q9NVF9 386 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 IP6K2Q9UHH9 426 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 MOSPD1Q9UJG1 213 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 ANAPC7Q9UJX3 599 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 PCDHGA8Q9Y5G5 932 aa14.68□□□□□ -0.06
SHMT2-235ENST00000557740 A0A1W2PNU3 283 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-235ENST00000557740 TTC24A2A3L6 582 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-235ENST00000557740 TMEM202A6NGA9 273 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 D6RAR5 112 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 PDE2AO00408 941 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-235ENST00000557740 NTN3O00634 580 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-235ENST00000557740 TNFRSF10CO14798 259 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 KLK10O43240 276 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 SERPING1P05155 500 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 RPLP0P05388 317 aaKnown RBP14.67□□□□□ -0.06
SHMT2-235ENST00000557740 CYP2A6P11509 494 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-235ENST00000557740 VIPR1P32241 457 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 SSR1P43307 286 aaKnown RBP14.67□□□□□ -0.06
SHMT2-235ENST00000557740 MMP13P45452 471 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 FANCCQ00597 558 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 HGSNATQ68CP4 663 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 KCTD16Q68DU8 428 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 LUZP1Q86V48 1076 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 NIPA2Q8N8Q9 360 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 SLC39A7Q92504 469 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 SPOCK2Q92563 424 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 SYN2Q92777 582 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-235ENST00000557740 IQCDQ96DY2 449 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 CCDC97Q96F63 343 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-235ENST00000557740 SLC46A1Q96NT5 459 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 MGME1Q9BQP7 344 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 FUCA2Q9BTY2 467 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 NUP85Q9BW27 656 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 CBX8Q9HC52 389 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 PCDH18Q9HCL0 1135 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 EPB41L5Q9HCM4 733 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 KCTD5Q9NXV2 234 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 PCDHGC4Q9Y5F7 938 aa14.67□□□□□ -0.06
SHMT2-235ENST00000557740 RP1P56715 2156 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 SYCE3A1L190 88 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 PRSS38A1L453 326 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 PMS2P1A4D2B8 440 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 B4DGG1 531 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 TMX2-CTNND1H3BSU7 103 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 TK2O00142 265 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 CASC3O15234 703 aaKnown RBP14.66□□□□□ -0.06
SHMT2-235ENST00000557740 HTRA2O43464 458 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-235ENST00000557740 MAFKO60675 156 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 TNFSF15O95150 251 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 HOXC4P09017 264 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-235ENST00000557740 MYCLP1P12525 358 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-235ENST00000557740 GM2AP17900 193 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 CR2P20023 1033 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 TRIM23P36406 574 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 MLLT3P42568 568 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-235ENST00000557740 CDH6P55285 790 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 UBASH3AP57075 661 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 ZBED6P86452 979 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 SLC25A11Q02978 314 aaKnown RBP14.66□□□□□ -0.06
SHMT2-235ENST00000557740 NFKBIBQ15653 356 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 CNGA3Q16281 694 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 TSR1Q2NL82 804 aaKnown RBP14.66□□□□□ -0.06
SHMT2-235ENST00000557740 RALGPS1Q5JS13 557 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 MARC1Q5VT66 337 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 DENND2CQ68D51 928 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 TXNRD3NBQ6F5E7 133 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 PNCKQ6P2M8 343 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 FAM46DQ8NEK8 389 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 LIN37Q96GY3 246 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-235ENST00000557740 BTBD6Q96KE9 485 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 COQ10AQ96MF6 247 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 NSMCE3Q96MG7 304 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 DPH1Q9BZG8 443 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 STRADBQ9C0K7 418 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 SUDS3Q9H7L9 328 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-235ENST00000557740 NOD2Q9HC29 1040 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 CYP4F12Q9HCS2 524 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 MRPL40Q9NQ50 206 aaKnown RBP14.66□□□□□ -0.06
SHMT2-235ENST00000557740 PHPT1Q9NRX4 125 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-235ENST00000557740 RABGEF1Q9UJ41 708 aa14.66□□□□□ -0.06
SHMT2-235ENST00000557740 GOLGA6CA6NDK9 693 aa14.65□□□□□ -0.06
SHMT2-235ENST00000557740 GOLGA6BA6NDN3 693 aa14.65□□□□□ -0.06
SHMT2-235ENST00000557740 GOLGA6L19H0YKK7 550 aa14.65□□□□□ -0.06
SHMT2-235ENST00000557740 MYO1FO00160 1098 aa14.65□□□□□ -0.06
SHMT2-235ENST00000557740 HEXIM1O94992 359 aaKnown RBP14.65□□□□□ -0.06
SHMT2-235ENST00000557740 PEX11BO96011 259 aa14.65□□□□□ -0.06
SHMT2-235ENST00000557740 CYP1A2P05177 515 aa14.65□□□□□ -0.06
SHMT2-235ENST00000557740 ITGA2BP08514 1039 aa14.65□□□□□ -0.06
SHMT2-235ENST00000557740 GOLGA6DP0CG33 693 aa14.65□□□□□ -0.06
SHMT2-235ENST00000557740 KRT10P13645 584 aa14.65□□□□□ -0.06
SHMT2-235ENST00000557740 GJC1P36383 396 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms