RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	TPI1	P60174	286 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	RHD	Q02161	417 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	SRSF6	Q13247	344 aa	Known RBP	11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	MTM1	Q13496	603 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	SPIDR	Q14159	915 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	LY6D	Q14210	128 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	ELOC	Q15369	112 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	BROX	Q5VW32	411 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	KIAA1614	Q5VZ46	1190 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	ESRP1	Q6NXG1	681 aa	Known RBP	11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	FOXR1	Q6PIV2	292 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	BRAT1	Q6PJG6	821 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	LIPI	Q6XZB0	460 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	CBARP	Q8N350	705 aa	Predicted RBP	11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	SDR16C5	Q8N3Y7	309 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	CCL4L1	Q8NHW4	92 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	WDR48	Q8TAF3	677 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	GLMN	Q92990	594 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	LIN37	Q96GY3	246 aa	Predicted RBP	11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	TUBGCP5	Q96RT8	1024 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	SNRNP25	Q9BV90	132 aa	Known RBP	11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	FOXP3	Q9BZS1	431 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	DHX35	Q9H5Z1	703 aa	Known RBP	11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	SEPT11	Q9NVA2	429 aa	Known RBP	11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	PCSK1N	Q9UHG2	260 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	GPR34	Q9UPC5	381 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	AP4E1	Q9UPM8	1137 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	ST14	Q9Y5Y6	855 aa		11.22	□□□□□ -0.61
HNRNPC-231	ENST00000557336	UNC13C	Q8NB66	2214 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	TMCO5B	A8MYB1	307 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336		D6RAR5	112 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	PLD2	O14939	933 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	ITGA2B	P08514	1039 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	ALPI	P09923	528 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	KRT10	P13645	584 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	HGF	P14210	728 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	TCF4	P15884	667 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	FER	P16591	822 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	MIP	P30301	263 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	UGT1A5	P35504	534 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	BLK	P51451	505 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	KIAA1024L	P59773	190 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	ZFP36L1	Q07352	338 aa	Known RBP	11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	DPYS	Q14117	519 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	GRM3	Q14832	879 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	PTPRR	Q15256	657 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	TGIF1	Q15583	401 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	QPCT	Q16769	361 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	ERMARD	Q5T6L9	678 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	DCUN1D2	Q6PH85	259 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	RFX8	Q6ZV50	586 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	ZNF605	Q86T29	641 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	WDR92	Q96MX6	357 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	PSKH2	Q96QS6	385 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	NCAPG	Q9BPX3	1015 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	TMEM168	Q9H0V1	697 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	ETNK2	Q9NVF9	386 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	CWC15	Q9P013	229 aa	Known RBP	11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	KL	Q9UEF7	1012 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	APPL1	Q9UKG1	709 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	PCDHGA7	Q9Y5G6	932 aa		11.21	□□□□□ -0.61
HNRNPC-231	ENST00000557336	ANKRD62	A6NC57	917 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336		A8MX80	341 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	EEF2K	O00418	725 aa	Known RBP	11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	DDX3X	O00571	662 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	1e-57	■■□□□ 12.4
HNRNPC-231	ENST00000557336	LRCH4	O75427	683 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PALM	O75781	387 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	RPLP0	P05388	317 aa	Known RBP	11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	TPM2	P07951	284 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	HOXC4	P09017	264 aa	Predicted RBP	11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CTSE	P14091	401 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CR2	P20023	1033 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	XPA	P23025	273 aa	Predicted RBP	11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PSMA2	P25787	234 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	IL1R2	P27930	398 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	HTR1B	P28222	390 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	SLC5A2	P31639	672 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CCKBR	P32239	447 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ETV5	P41161	510 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	IL10RB	Q08334	325 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	SLC10A7	Q0GE19	358 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	MSS51	Q4VC12	460 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	TAF1B	Q53T94	588 aa	Predicted RBP	11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CERCAM	Q5T4B2	595 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ERAP2	Q6P179	960 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	DPPA4	Q7L190	304 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	RAB11FIP2	Q7L804	512 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	C17orf82	Q86X59	251 aa	Predicted RBP	11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	NRROS	Q86YC3	692 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PGBD5	Q8N414	524 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ARL14	Q8N4G2	192 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	OR56A4	Q8NGH8	313 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	COQ10A	Q96MF6	247 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	GFM1	Q96RP9	751 aa	Known RBP	11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	LRRN3	Q9H3W5	708 aa		11.2	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ATP13A3	Q9H7F0	1226 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms