RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 CAPS2Q9BXY5 557 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.58□□□□□ -1.68
SRP54-212ENST00000556992 CENPHQ9H3R5 247 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 CNOT10Q9H9A5 744 aaKnown RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 PPCSQ9HAB8 311 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 POPDC2Q9HBU9 364 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 PCDH9Q9HC56 1237 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 PNPLA8Q9NP80 782 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 IL23AQ9NPF7 189 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 KLHL11Q9NVR0 708 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 BCCIPQ9P287 314 aaKnown RBP eCLIP4.58□□□□□ -1.68
SRP54-212ENST00000556992 TRPS1Q9UHF7 1281 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 ZNHIT2Q9UHR6 403 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 MRPS23Q9Y3D9 190 aaKnown RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 NME7Q9Y5B8 376 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 PCDHB7Q9Y5E2 793 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 RAD54BQ9Y620 910 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 A0A087WUV0 522 aaPredicted RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 SLC12A8A0AV02 714 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 TLDC2A0PJX2 215 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 OR6C75A6NL08 312 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 SRRM3A6NNA2 597 aaPredicted RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 HACD1B0YJ81 288 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 E7EVH7 732 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 H7C0C1 242 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 TMEM189-UBE2V1I3L0A0 370 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 M0QYT0 321 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 MASP2O00187 686 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 CLDN5O00501 218 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 RASGRF2O14827 1237 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 SYN3O14994 580 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 TP73O15350 636 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 NCAM2O15394 837 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 RGS16O15492 202 aaPredicted RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 HCRTO43612 131 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 H2AFYO75367 372 aaKnown RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 GCATO75600 419 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 BEST1O76090 585 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 STK10O94804 968 aaKnown RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 TOX4O94842 621 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 AGTP01019 485 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 LMNAP02545 664 aaKnown RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 IVLP07476 585 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 CD48P09326 243 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 RBP3P10745 1247 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 TSHRP16473 764 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 ATP2A2P16615 1042 aaKnown RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 HK1P19367 917 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 TKTP29401 623 aaKnown RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 ATP5DP30049 168 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 SDHAP31040 664 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 CYP2C18P33260 490 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 RPL22P35268 128 aaKnown RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 MAGEA4P43358 317 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 ATP5OP48047 213 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 LMAN1P49257 510 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 NDUFV1P49821 464 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 SULT1E1P49888 294 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 GYS2P54840 703 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 ARL4CP56559 192 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 DAOAP59103 153 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 SARNPP82979 210 aaKnown RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 YWHAHQ04917 246 aaPredicted RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 DEUP1Q05D60 604 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 DSC1Q08554 894 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 ADCY1Q08828 1119 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 ADIGQ0VDE8 80 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 SMARCB1Q12824 385 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 ELAVL2Q12926 359 aaKnown RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 NOMO1Q15155 1222 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 CSRP2Q16527 193 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 KYNUQ16719 465 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 CDO1Q16878 200 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 TTMPQ5BVD1 217 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 PPP6R3Q5H9R7 873 aaPredicted RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 KCTD16Q68DU8 428 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 TRNP1Q6NT89 227 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 ABHD17CQ6PCB6 329 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 C1orf228Q6PIY5 440 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 CD300LGQ6UXG3 332 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 KDM7AQ6ZMT4 941 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 LEKR1Q6ZMV7 388 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 CYP4V2Q6ZWL3 525 aaPredicted RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 RHOUQ7L0Q8 258 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 CXorf67Q86X51 503 aaPredicted RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 CDKL3Q8IVW4 592 aaPredicted RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 COLGALT2Q8IYK4 626 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 CNPY4Q8N129 248 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 PDIK1LQ8N165 341 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 ARHGAP18Q8N392 663 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 PQLC3Q8N755 202 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 FAM71DQ8N9W8 422 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 SLC7A14Q8TBB6 771 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 RIN2Q8WYP3 895 aaPredicted RBP4.57□□□□□ -1.68
SRP54-212ENST00000556992 NTAN1Q96AB6 310 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 FAM149B1Q96BN6 582 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 FAF2Q96CS3 445 aa4.57□□□□□ -1.68
SRP54-212ENST00000556992 RTP4Q96DX8 246 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms