RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 L1CAMP32004 1257 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 RECQLP46063 649 aaPredicted RBP10.14□□□□□ -0.79
SCFD1-220ENST00000556486 MTIF2P46199 727 aaKnown RBP10.14□□□□□ -0.79
SCFD1-220ENST00000556486 SULT1E1P49888 294 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 NEK3P51956 506 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 ARF5P84085 180 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 EIF2B5Q13144 721 aaKnown RBP10.14□□□□□ -0.79
SCFD1-220ENST00000556486 VWA3BQ502W6 1294 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 MANEAQ5SRI9 462 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 FAM102AQ5T9C2 384 aaPredicted RBP10.14□□□□□ -0.79
SCFD1-220ENST00000556486 KLHDC7AQ5VTJ3 777 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 TRNP1Q6NT89 227 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 TREML4Q6UXN2 200 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 TFAP2DQ7Z6R9 452 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 TRIM42Q8IWZ5 723 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 DENND6BQ8NEG7 585 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 RAB7BQ96AH8 199 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 GRAMD1AQ96CP6 724 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 TUBGCP2Q9BSJ2 902 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 SLC17A9Q9BYT1 436 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 ZYG11BQ9C0D3 744 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 SLC25A18Q9H1K4 315 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 PLCB1Q9NQ66 1216 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 NCKIPSDQ9NZQ3 722 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 MPP6Q9NZW5 540 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 FOXJ2Q9P0K8 574 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 FADS3Q9Y5Q0 445 aa10.14□□□□□ -0.79
SCFD1-220ENST00000556486 SPTAN1Q13813 2472 aaKnown RBP10.14□□□□□ -0.79
SCFD1-220ENST00000556486 TSPAN6O43657 245 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 TCEA3O75764 348 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 JMJD7P0C870 316 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 UCHL3P15374 230 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 ETV5P41161 510 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 RABIFP47224 123 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 MAPKAPK2P49137 400 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 CCNHP51946 323 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-220ENST00000556486 MAPK10P53779 464 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 GEMIN4P57678 1058 aaKnown RBP10.13□□□□□ -0.79
SCFD1-220ENST00000556486 RNASE9P60153 205 aaKnown RBP10.13□□□□□ -0.79
SCFD1-220ENST00000556486 NOMO3P69849 1222 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 CCL7P80098 99 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 GNA12Q03113 381 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 CARD16Q5EG05 197 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 CT47A1Q5JQC4 288 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-220ENST00000556486 NLRP14Q86W24 1093 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 ZNF677Q86XU0 584 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 SDR16C5Q8N3Y7 309 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 CELF2-AS1Q8N7Q2 184 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 Q8N9G6 341 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-220ENST00000556486 KYQ8NBH2 561 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 MSANTD4Q8NCY6 345 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 OR7D4Q8NG98 312 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 FEM1CQ96JP0 617 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 TBATAQ96M53 351 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 GFM1Q96RP9 751 aaKnown RBP10.13□□□□□ -0.79
SCFD1-220ENST00000556486 KLF6Q99612 283 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-220ENST00000556486 HEPHQ9BQS7 1158 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 FUCA2Q9BTY2 467 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 LRRC61Q9BV99 259 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 BOCQ9BWV1 1114 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 APOBEC3BQ9UH17 382 aaKnown RBP10.13□□□□□ -0.79
SCFD1-220ENST00000556486 PADI4Q9UM07 663 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 NEU3Q9UQ49 428 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 ITM2BQ9Y287 266 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 SNX10Q9Y5X0 201 aa10.13□□□□□ -0.79
SCFD1-220ENST00000556486 A0A096LPE4 126 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 A0A1W2PPZ6 126 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 D6RAR5 112 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 F8VZ95 297 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 TPP1O14773 563 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 DNAJC6O75061 913 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 RPLP0P05388 317 aaKnown RBP10.12□□□□□ -0.79
SCFD1-220ENST00000556486 LIPCP11150 499 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 NFKB1P19838 968 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 MMP8P22894 467 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 ADRA1BP35368 520 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 PFN3P60673 137 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 PLAURQ03405 335 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 CAMK4Q16566 473 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 LRRC73Q5JTD7 316 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 FIGNL1Q6PIW4 674 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 PARS2Q7L3T8 475 aaKnown RBP10.12□□□□□ -0.79
SCFD1-220ENST00000556486 FAM169BQ8N8A8 192 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 FBXO27Q8NI29 283 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 CENPIQ92674 756 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-220ENST00000556486 ARHGEF26Q96DR7 871 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 LIN37Q96GY3 246 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-220ENST00000556486 CFAP57Q96MR6 1250 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 OSBPL1AQ9BXW6 950 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 STK33Q9BYT3 514 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 CPEB1Q9BZB8 566 aaKnown RBP10.12□□□□□ -0.79
SCFD1-220ENST00000556486 BHLHE41Q9C0J9 482 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-220ENST00000556486 CLPBQ9H078 707 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 ATP13A1Q9HD20 1204 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 ZNF71Q9NQZ8 489 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-220ENST00000556486 FANCLQ9NW38 375 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 TMEM248Q9NWD8 314 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 KCNK4Q9NYG8 393 aa10.12□□□□□ -0.79
SCFD1-220ENST00000556486 NOCTQ9UK39 431 aaKnown RBP10.12□□□□□ -0.79
SCFD1-220ENST00000556486 PLAAQ9Y263 795 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms