RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 POLMQ9NP87 494 aaPredicted RBP11.07□□□□□ -0.64
TMEM260-208ENST00000555905 CHRAC1Q9NRG0 131 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 SCML1Q9UN30 329 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 PPIL1Q9Y3C6 166 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 SIT1Q9Y3P8 196 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 ZNF711Q9Y462 761 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 SPO11Q9Y5K1 396 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 RPS6KL1Q9Y6S9 549 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 C1orf232A0A0U1RR37 186 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 TCRBV21S2A2A0A5A6 115 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 MROH6A6NGR9 719 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 MID1O15344 667 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 RIPK2O43353 540 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 USP1O94782 785 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 PAPSS2O95340 614 aaPredicted RBP11.06□□□□□ -0.64
TMEM260-208ENST00000555905 SLC4A1P02730 911 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 PRKCGP05129 697 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 ACADMP11310 421 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 ADRB3P13945 408 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 PAMP19021 973 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 COL9A1P20849 921 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 LPOP22079 712 aaPredicted RBP11.06□□□□□ -0.64
TMEM260-208ENST00000555905 VIPR1P32241 457 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 HSD17B3P37058 310 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 ZBTB16Q05516 673 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 SIGLEC14Q08ET2 396 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 ELP6Q0PNE2 266 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 MSLNQ13421 630 aaPredicted RBP11.06□□□□□ -0.64
TMEM260-208ENST00000555905 ARHGEF7Q14155 803 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 CRY1Q16526 586 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 SKIDA1Q1XH10 827 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 TTC31Q49AM3 519 aaPredicted RBP11.06□□□□□ -0.64
TMEM260-208ENST00000555905 ANKRD20A4Q4UJ75 823 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 LRRC73Q5JTD7 316 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 STEAP4Q687X5 459 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 UNC5AQ6ZN44 842 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 CAPN12Q6ZSI9 719 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 TRIM67Q6ZTA4 783 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 PARS2Q7L3T8 475 aaKnown RBP11.06□□□□□ -0.64
TMEM260-208ENST00000555905 CACUL1Q86Y37 369 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 HDDC3Q8N4P3 179 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 GSDMBQ8TAX9 411 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 GANCQ8TET4 914 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 EDAQ92838 391 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 PEX13Q92968 403 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 RAB7BQ96AH8 199 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 ARRDC3Q96B67 414 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 ZNF669Q96BR6 464 aaPredicted RBP11.06□□□□□ -0.64
TMEM260-208ENST00000555905 SIPA1Q96FS4 1042 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 MCCC1Q96RQ3 725 aaPredicted RBP11.06□□□□□ -0.64
TMEM260-208ENST00000555905 LYSMD1Q96S90 227 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 OMDQ99983 421 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 WDR83Q9BRX9 315 aaKnown RBP11.06□□□□□ -0.64
TMEM260-208ENST00000555905 MKRN2Q9H000 416 aaKnown RBP11.06□□□□□ -0.64
TMEM260-208ENST00000555905 ZFYVE1Q9HBF4 777 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 LRRC4CQ9HCJ2 640 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 PCDH12Q9NPG4 1184 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 PKP3Q9Y446 797 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 ARL5AQ9Y689 179 aa11.06□□□□□ -0.64
TMEM260-208ENST00000555905 A0A087WUV0 522 aaPredicted RBP11.05□□□□□ -0.64
TMEM260-208ENST00000555905 CCDC78A2IDD5 438 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 NPIPB15A6NHN6 443 aaPredicted RBP11.05□□□□□ -0.64
TMEM260-208ENST00000555905 A8MX80 341 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 NEMP1O14524 444 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 STX7O15400 261 aaKnown RBP11.05□□□□□ -0.64
TMEM260-208ENST00000555905 DCXO43602 365 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 LDB2O43679 373 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 RNASEH2AO75792 299 aaKnown RBP11.05□□□□□ -0.64
TMEM260-208ENST00000555905 ALDH1A2O94788 518 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 ABHD2P08910 425 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 ZNF30P17039 623 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 NMBRP28336 390 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 SSTR1P30872 391 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 STX2P32856 288 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 P2RY2P41231 377 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 RPS9P46781 194 aaKnown RBP11.05□□□□□ -0.64
TMEM260-208ENST00000555905 METAP1P53582 386 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 GPX6P59796 221 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 CNTN1Q12860 1018 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 FZD5Q13467 585 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 CRYMQ14894 314 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 PTPRRQ15256 657 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 TSTD2Q5T7W7 516 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 CRTC1Q6UUV9 634 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 CES3Q6UWW8 571 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 KIAA1324Q6UXG2 1013 aaKnown RBP11.05□□□□□ -0.64
TMEM260-208ENST00000555905 DPPA4Q7L190 304 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 HDXQ7Z353 690 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 LYSMD3Q7Z3D4 306 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 TMEM135Q86UB9 458 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.05□□□□□ -0.64
TMEM260-208ENST00000555905 FLCNQ8NFG4 579 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 MDGA1Q8NFP4 955 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 STYXQ8WUJ0 223 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 PBXIP1Q96AQ6 731 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 CLDN23Q96B33 292 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 SMIM14Q96QK8 99 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 IER2Q9BTL4 223 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 CD248Q9HCU0 757 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 PPANQ9NQ55 473 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms