RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SCUBE3Q8IX30 993 aa15.71■□□□□ 0.11
SYNE3-203ENST00000554873 IRF2BPLQ9H1B7 796 aa15.71■□□□□ 0.11
SYNE3-203ENST00000554873 RUBCNLQ9H714 662 aa15.71■□□□□ 0.11
SYNE3-203ENST00000554873 MYO18AQ92614 2054 aaKnown RBP15.71■□□□□ 0.11
SYNE3-203ENST00000554873 DPYSL4O14531 572 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 GAS2O43903 313 aaKnown RBP15.71■□□□□ 0.1
SYNE3-203ENST00000554873 TRIM13O60858 407 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 TMCC2O75069 709 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 CCNKO75909 580 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 NAT2P11245 290 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 CD40LGP29965 261 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 CRADDP78560 199 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 PLCL1Q15111 1095 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 NPTX1Q15818 432 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 SMU1Q2TAY7 513 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 SAMD4BQ5PRF9 694 aaKnown RBP15.71■□□□□ 0.1
SYNE3-203ENST00000554873 SIMC1Q8NDZ2 872 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 OR6Q1Q8NGQ2 317 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 FIG4Q92562 907 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 CENPNQ96H22 339 aaPredicted RBP15.71■□□□□ 0.1
SYNE3-203ENST00000554873 ZNF670Q9BS34 389 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 PDGFDQ9GZP0 370 aaPredicted RBP15.71■□□□□ 0.1
SYNE3-203ENST00000554873 KCNN3Q9UGI6 736 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 SPEF1Q9Y4P9 236 aa15.71■□□□□ 0.1
SYNE3-203ENST00000554873 F5H423 210 aaPredicted RBP15.7■□□□□ 0.1
SYNE3-203ENST00000554873 KCNK2O95069 426 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 ARIH2O95376 493 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 EDNRBP24530 442 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 FASP25445 335 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 TYK2P29597 1187 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 SDC4P31431 198 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 ATICP31939 592 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 SERPINB10P48595 397 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 CLCN3P51790 818 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 STX5Q13190 355 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 TREML2Q5T2D2 321 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 FKBP9P1Q75LS8 142 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 TNS4Q8IZW8 715 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 FAM110BQ8TC76 370 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 CDKL2Q92772 493 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 TBCBQ99426 244 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 B3GNT4Q9C0J1 378 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 STMN3Q9NZ72 180 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 OAZ3Q9UMX2 235 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 AP4E1Q9UPM8 1137 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 FAM149AA5PLN7 773 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 GRID2O43424 1007 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 ZBTB7AO95365 584 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 PPP5CP53041 499 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 GALK2Q01415 458 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 SNX17Q15036 470 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 CDK10Q15131 360 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 CRY1Q16526 586 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 HIST2H2ACQ16777 129 aaPredicted RBP15.7■□□□□ 0.1
SYNE3-203ENST00000554873 SLC45A3Q96JT2 553 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 GPR20Q99678 358 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 ZNF358Q9NW07 568 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 VTI1BQ9UEU0 232 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 AURKCQ9UQB9 309 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 VWA7Q9Y334 891 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 MAU2Q9Y6X3 613 aa15.7■□□□□ 0.1
SYNE3-203ENST00000554873 EI24O14681 340 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 MDM4O15151 490 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 B4GAT1O43505 415 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 ALDH1A2O94788 518 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 TGFB3P10600 412 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 ZNF135P52742 658 aaPredicted RBP15.69■□□□□ 0.1
SYNE3-203ENST00000554873 CTAG1AP78358 180 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 NIPAL4Q0D2K0 466 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 INCA1Q0VD86 236 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 LAMC2Q13753 1193 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 POLD3Q15054 466 aaPredicted RBP15.69■□□□□ 0.1
SYNE3-203ENST00000554873 DGUOKQ16854 277 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 GOLGA7BQ2TAP0 167 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 SLC10A6Q3KNW5 377 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 GLRA4Q5JXX5 417 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 EFCAB12Q6NXP0 572 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 NEK5Q6P3R8 708 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 CASC4Q6P4E1 433 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 PRR23CQ6ZRP0 262 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 GK5Q6ZS86 529 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 MICALL2Q8IY33 904 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 ZNF560Q96MR9 790 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 B3GNT5Q9BYG0 378 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 PIH1D1Q9NWS0 290 aaKnown RBP15.69■□□□□ 0.1
SYNE3-203ENST00000554873 CACNA2D2Q9NY47 1150 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 ZNF221Q9UK13 617 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 TRIP11Q15643 1979 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 B8ZZF3 427 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 SLCO1B7G3V0H7 640 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 G3V2L1 256 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 RAD51BO15315 384 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 DDHD2O94830 711 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 DLGAP3O95886 979 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 CHRNGP07510 517 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 DDX5P17844 614 aaKnown RBP15.69■□□□□ 0.1
SYNE3-203ENST00000554873 IL10P22301 178 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 HTR1BP28222 390 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 ETV3P41162 512 aa15.69■□□□□ 0.1
SYNE3-203ENST00000554873 ATXN1P54253 815 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms