RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PCSK1NQ9UHG2 260 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 IPO11Q9UI26 975 aaKnown RBP7.81□□□□□ -1.16
ABCD4-220ENST00000553998 TUBD1Q9UJT1 453 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 VPS28Q9UK41 221 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 VANGL2Q9ULK5 521 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 AP4E1Q9UPM8 1137 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 MAN2B2Q9Y2E5 1009 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 PPP2R2CQ9Y2T4 447 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 ALG6Q9Y672 507 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 DUSP10Q9Y6W6 482 aa7.81□□□□□ -1.16
ABCD4-220ENST00000553998 A0A1W2PQM1 296 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 MACROD2A1Z1Q3 448 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 TMEM110-MUSTN1A8MSY1 372 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 WASH4PA8MWX3 477 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 ZNF487B1APH4 448 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 D6RAR5 112 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 K7ERQ8 282 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 FGF10O15520 208 aaPredicted RBP7.8□□□□□ -1.16
ABCD4-220ENST00000553998 PSTPIP1O43586 416 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 TSPAN6O43657 245 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 BUB1O43683 1085 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 SPOPO43791 374 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 LEFTY1O75610 366 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 ANXA6P08133 673 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 RARAP10276 462 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 RHOQP17081 205 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 COMTP21964 271 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 CD82P27701 267 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 EPHB2P29323 1055 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 ARL4AP40617 200 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 SSR1P43307 286 aaKnown RBP7.8□□□□□ -1.16
ABCD4-220ENST00000553998 MAPKAPK2P49137 400 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 NUMBP49757 651 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 IRAK1P51617 712 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 SLC20A2Q08357 652 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 PTK2BQ14289 1009 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 PDK2Q15119 407 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 PRRT3Q5FWE3 981 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 MANEAQ5SRI9 462 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 ARTNQ5T4W7 220 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 ESRP1Q6NXG1 681 aaKnown RBP7.8□□□□□ -1.16
ABCD4-220ENST00000553998 DPY19L3Q6ZPD9 716 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 DAAM2Q86T65 1068 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 SETD3Q86TU7 594 aaPredicted RBP7.8□□□□□ -1.16
ABCD4-220ENST00000553998 VSIG1Q86XK7 387 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 MAP7D3Q8IWC1 876 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 RHOT1Q8IXI2 618 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 PHACTR4Q8IZ21 702 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 RBFAQ8N0V3 343 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 FSTL5Q8N475 847 aaPredicted RBP7.8□□□□□ -1.16
ABCD4-220ENST00000553998 ARL10Q8N8L6 244 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 LRRC57Q8N9N7 239 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 DCAF4L2Q8NA75 395 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 ZSCAN1Q8NBB4 408 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 OR6C4Q8NGE1 309 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 FAM71BQ8TC56 605 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 KIAA1524Q8TCG1 905 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 RAB7BQ96AH8 199 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 VOPP1Q96AW1 172 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 TMEM74Q96NL1 305 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 ALS2CR12Q96Q35 445 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 GFM1Q96RP9 751 aaKnown RBP7.8□□□□□ -1.16
ABCD4-220ENST00000553998 LRRC61Q9BV99 259 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 SLC12A9Q9BXP2 914 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 ZYG11BQ9C0D3 744 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 CEP44Q9C0F1 390 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 EPN3Q9H201 632 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 DHX35Q9H5Z1 703 aaKnown RBP7.8□□□□□ -1.16
ABCD4-220ENST00000553998 CATSPERBQ9H7T0 1116 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 ZWILCHQ9H900 591 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 TMPRSS4Q9NRS4 437 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 TMEM248Q9NWD8 314 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 DDX56Q9NY93 547 aaKnown RBP7.8□□□□□ -1.16
ABCD4-220ENST00000553998 APOBEC3BQ9UH17 382 aaKnown RBP7.8□□□□□ -1.16
ABCD4-220ENST00000553998 VPS51Q9UID3 782 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 RABGEF1Q9UJ41 708 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 TFR2Q9UP52 801 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.8□□□□□ -1.16
ABCD4-220ENST00000553998 CHD5Q8TDI0 1954 aa7.8□□□□□ -1.16
ABCD4-220ENST00000553998 TRPM6Q9BX84 2022 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 DOPEY2Q9Y3R5 2298 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 ILVBLA1L0T0 632 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 GRID2IPA4D2P6 1211 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 GOLGA6L9A6NEM1 432 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 IGLON5A6NGN9 336 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 MIF4GDA9UHW6 222 aaKnown RBP7.79□□□□□ -1.16
ABCD4-220ENST00000553998 FAM72CH0Y354 149 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 H3BRJ5 948 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 EEF2KO00418 725 aaKnown RBP7.79□□□□□ -1.16
ABCD4-220ENST00000553998 BNIP3LO60238 219 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 SNAP91O60641 907 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 SRGAP2O75044 1071 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 ZMPSTE24O75844 475 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 CNTN5O94779 1100 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 TCF4P15884 667 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 PNLIPP16233 465 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 TSHRP16473 764 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 CTNNA2P26232 953 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 ETFBP38117 255 aa7.79□□□□□ -1.16
ABCD4-220ENST00000553998 GGCXP38435 758 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms