RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 KLHL8Q9P2G9 620 aaPredicted RBP23.34■■□□□ 1.33
NEK9-203ENST00000553945 PPIL1Q9Y3C6 166 aa23.34■■□□□ 1.33
NEK9-203ENST00000553945 GOLGA6L9A6NEM1 432 aa23.33■■□□□ 1.33
NEK9-203ENST00000553945 RECQL5O94762 991 aaPredicted RBP23.33■■□□□ 1.33
NEK9-203ENST00000553945 HEXIM1O94992 359 aaKnown RBP23.33■■□□□ 1.33
NEK9-203ENST00000553945 RBL1P28749 1068 aa23.33■■□□□ 1.33
NEK9-203ENST00000553945 HNF1BP35680 557 aa23.33■■□□□ 1.33
NEK9-203ENST00000553945 PFN3P60673 137 aa23.33■■□□□ 1.33
NEK9-203ENST00000553945 SHBQ15464 509 aa23.33■■□□□ 1.33
NEK9-203ENST00000553945 MEI1Q5TIA1 1274 aa23.33■■□□□ 1.33
NEK9-203ENST00000553945 SPATA22Q8NHS9 363 aa23.33■■□□□ 1.33
NEK9-203ENST00000553945 UBE2Q2Q8WVN8 375 aa23.33■■□□□ 1.33
NEK9-203ENST00000553945 MCCC1Q96RQ3 725 aaPredicted RBP23.33■■□□□ 1.33
NEK9-203ENST00000553945 A0A0J9YYE9 177 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 GIPC1O14908 333 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 YKT6O15498 198 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 PCDHGA12O60330 932 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 PRLP01236 227 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 TRBC1P01850 177 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 PCCBP05166 539 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 LHCGRP22888 699 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 RXRGP48443 463 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 RPL26P61254 145 aaKnown RBP23.32■■□□□ 1.32
NEK9-203ENST00000553945 ARHGEF7Q14155 803 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 AGERQ15109 404 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 RPS6KA1Q15418 735 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 PCSK7Q16549 785 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 DARS2Q6PI48 645 aaKnown RBP23.32■■□□□ 1.32
NEK9-203ENST00000553945 ERMP1Q7Z2K6 904 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 PID1Q7Z2X4 250 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 TSPAN33Q86UF1 283 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 GATAD2AQ86YP4 633 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 CDKL3Q8IVW4 592 aaPredicted RBP23.32■■□□□ 1.32
NEK9-203ENST00000553945 ZNF567Q8N184 647 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 FERMT1Q9BQL6 677 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 ADGRE3Q9BY15 652 aa23.32■■□□□ 1.32
NEK9-203ENST00000553945 RPL26L1Q9UNX3 145 aaKnown RBP23.32■■□□□ 1.32
NEK9-203ENST00000553945 FLRT2O43155 660 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 ITGAVP06756 1048 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 RBP3P10745 1247 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 CEACAM1P13688 526 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 GM2AP17900 193 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 NFKB1P19838 968 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 CD68P34810 354 aaPredicted RBP23.31■■□□□ 1.32
NEK9-203ENST00000553945 THOP1P52888 689 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 BNIP3Q12983 259 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 PDE1CQ14123 709 aaPredicted RBP23.31■■□□□ 1.32
NEK9-203ENST00000553945 SEL1L2Q5TEA6 688 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 KDELC2Q7Z4H8 507 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 RHBDD1Q8TEB9 315 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 COQ10AQ96MF6 247 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 VAT1Q99536 393 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 GPR27Q9NS67 375 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 BTBD3Q9Y2F9 522 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 KNL1Q8NG31 2342 aa23.31■■□□□ 1.32
NEK9-203ENST00000553945 A0A0U1RQS6 177 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 SPTY2D1-AS1A0A0U1RR47 76 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 CAPN8A6NHC0 703 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 F5H423 210 aaPredicted RBP23.3■■□□□ 1.32
NEK9-203ENST00000553945 PMPCBO75439 489 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 MT-CYBP00156 380 aaPredicted RBP23.3■■□□□ 1.32
NEK9-203ENST00000553945 EPHA8P29322 1005 aaPredicted RBP23.3■■□□□ 1.32
NEK9-203ENST00000553945 YPEL5P62699 121 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 FZD2Q14332 565 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 GALNT3Q14435 633 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 INPP5AQ14642 412 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 ZNF542PQ5EBM4 170 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 TPRG1LQ5T0D9 272 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 CRTC1Q6UUV9 634 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 DBX2Q6ZNG2 339 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 HSD11B1LQ7Z5J1 315 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 TTC13Q8NBP0 860 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 PLA2G15Q8NCC3 412 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 TRIM58Q8NG06 486 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 SAP25Q8TEE9 199 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 TADA1Q96BN2 335 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 IFT43Q96FT9 208 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 KCNF1Q9H3M0 494 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 DNAJC28Q9NX36 388 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 UBP1Q9NZI7 540 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 TRHDEQ9UKU6 1024 aa23.3■■□□□ 1.32
NEK9-203ENST00000553945 TCRBV7S2A1N4TA0A589 114 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 KCNN4O15554 427 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 SDC3O75056 442 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 GRK6P43250 576 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 KLF1Q13351 362 aaPredicted RBP23.29■■□□□ 1.32
NEK9-203ENST00000553945 PTK2BQ14289 1009 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 QPCTQ16769 361 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 INAVAQ3KP66 663 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 LRRC66Q68CR7 880 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 NUS1Q96E22 293 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 PDLIM2Q96JY6 352 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 MLPHQ9BV36 600 aaPredicted RBP23.29■■□□□ 1.32
NEK9-203ENST00000553945 RSPH14Q9UHP6 348 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 PCOLCE2Q9UKZ9 415 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 OR1A2Q9Y585 309 aa23.29■■□□□ 1.32
NEK9-203ENST00000553945 SPAARA0A1B0GVQ0 90 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 ANKRD66B4E2M5 251 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 PSMD11O00231 422 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 TOR1BO14657 336 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms