RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SLC30A6Q6NXT4 461 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF767PQ75MW2 155 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 PDZD4Q76G19 769 aaPredicted RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF571Q7Z3V5 609 aaPredicted RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 S100A7AQ86SG5 101 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 CCDC116Q8IYX3 515 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 LRRN4Q8WUT4 740 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 APBB2Q92870 758 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 ASB2Q96Q27 587 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 WDR41Q9HAD4 459 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 CDYLQ9Y232 598 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 LOC102724200A0A096LPH7 203 aaPredicted RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 LOC102724428A0A0B4J2F2 783 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 SMPD2O60906 423 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 ATG12O94817 140 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 COX4I1P13073 169 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 SIK1P57059 783 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 RAB5BP61020 215 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 C2orf80Q0P641 193 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 CDKAL1Q5VV42 579 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 BEND5Q7L4P6 421 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 VPS25Q9BRG1 176 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 MMP28Q9H239 520 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF696Q9H7X3 374 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 ERVK-5Q9HDB9 667 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 PAK6Q9NQU5 681 aaPredicted RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM118AQ9NWS6 357 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 TREHO43280 583 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 ADH1CP00326 375 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 ICAM2P13598 275 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 PDGFRAP16234 1089 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 CARD18P57730 90 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 MZT2BQ6NZ67 158 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF551Q7Z340 670 aaPredicted RBP9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 NUDT13Q86X67 352 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 ZDHHC17Q8IUH5 632 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 DDX1Q92499 740 aaKnown RBP9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 INTS12Q96CB8 462 aaKnown RBP9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 FBXL20Q96IG2 436 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 NPAS2Q99743 824 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 C1orf112Q9NSG2 853 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF219Q9P2Y4 722 aaPredicted RBP9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 MAD2L2Q9UI95 211 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 CCDC61Q9Y6R9 512 aa9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 TROQ12816 1431 aaPredicted RBP9.02□□□□□ -0.96
GTF2A1-203ENST00000553612 TRIM38O00635 465 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 UQCRFS1P1P0C7P4 283 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 CD247P20963 164 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 ALDH7A1P49419 539 aaKnown RBP9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 RAET1GQ6H3X3 334 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 C11orf88Q6PI97 169 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 DHFR2Q86XF0 187 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 ZNF321PQ8N8H1 164 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 OR9Q1Q8NGQ5 310 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 WFIKKN2Q8TEU8 576 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 STON2Q8WXE9 905 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 CCDC74AQ96AQ1 378 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 MAGEB10Q96LZ2 347 aaPredicted RBP9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 WDR26Q9H7D7 661 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 EGFL7Q9UHF1 273 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 DERAQ9Y315 318 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 PCDHGA2Q9Y5H1 932 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 GRIN2BQ13224 1484 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 TCAPO15273 167 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 HS6ST1O60243 411 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 TOXO94900 526 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 CALCAP01258 141 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 CD2P06729 351 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 PLA2G4BP0C869 781 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 HPGDP15428 266 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 PTPN2P17706 415 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 MEOX2P50222 304 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 ACTR2P61160 394 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 SLC3A1Q07837 685 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 PDIA6Q15084 440 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 NAALADL2Q58DX5 795 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 THRSPQ92748 146 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 MARC2Q969Z3 335 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 BABAM1Q9NWV8 329 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 SNCAIPQ9Y6H5 919 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 STX16-NPEPL1H3BU86 382 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 NR5A2O00482 541 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 VNN2O95498 520 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 PSMC5P62195 406 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 DYNLL1P63167 89 aaKnown RBP9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 GCKRQ14397 625 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 LRIT3Q3SXY7 679 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 DNAJC24Q6P3W2 148 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 NLRX1Q86UT6 975 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 TXNRD3Q86VQ6 643 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 SCML4Q8N228 414 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 SH3YL1Q96HL8 342 aaPredicted RBP9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 CEP41Q9BYV8 373 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 ZNF334Q9HCZ1 680 aaPredicted RBP9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 TBC1D22BQ9NU19 505 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 WWOXQ9NZC7 414 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 PCDHGA1Q9Y5H4 931 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 ARHGEF40Q8TER5 1519 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 XDHP47989 1333 aa9.02□□□□□ -0.97
GTF2A1-203ENST00000553612 MIF4GDA9UHW6 222 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms