RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 TCRBV3S1A0A5B6 114 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 C7orf72A4D263 438 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 TCAF2A6NFQ2 919 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 I6L893 689 aaPredicted RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 XPO1O14980 1071 aaKnown RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 MTSS1O43312 755 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 HTRA2O43464 458 aaPredicted RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 AP2A1O95782 977 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 CHRNGP07510 517 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 CTSHP09668 335 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 GJA9P57773 515 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 E2F2Q14209 437 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 SQLEQ14534 574 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PSMD5Q16401 504 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 NRF1Q16656 503 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 UGP2Q16851 508 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 SAMD4BQ5PRF9 694 aaKnown RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 GRAMD4Q6IC98 578 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PPP4R4Q6NUP7 873 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 CLEC20AQ6ZU45 233 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 GPR180Q86V85 440 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PIGZQ86VD9 579 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 KCNMB4Q86W47 210 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 COLGALT2Q8IYK4 626 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 FIBCD1Q8N539 461 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 MFSD2AQ8NA29 543 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 AGR3Q8TD06 166 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 STYXQ8WUJ0 223 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 HSPBAP1Q96EW2 488 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 VPS39Q96JC1 886 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 SPACA7Q96KW9 195 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 GPR22Q99680 433 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 KATNAL1Q9BW62 490 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 AGO3Q9H9G7 860 aaKnown RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 SPAG4Q9NPE6 437 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 OLAHQ9NV23 265 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 ST3GAL5Q9UNP4 418 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 MYOCOSA0A1B0GUC4 107 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 TNPO2O14787 897 aaKnown RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 SEC24DO94855 1032 aaPredicted RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 LTFP02788 710 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 FYNP06241 537 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 BMP2P12643 396 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 AKR1A1P14550 325 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 GOT1P17174 413 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PNPLA4P41247 253 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 DPP6P42658 865 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 CLCNKBP51801 687 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 IRF9Q00978 393 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 C16orf72Q14CZ0 275 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 STK11Q15831 433 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 TMEM214Q6NUQ4 689 aaKnown RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 ISLR2Q6UXK2 745 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 ZBTB49Q6ZSB9 765 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 BHLHA9Q7RTU4 235 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PIWIL4Q7Z3Z4 852 aaKnown RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 ZNF354CQ86Y25 554 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 HERC6Q8IVU3 1022 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.38□□□□□ -1.23
BEST3-212ENST00000553096 TOP6BLQ8N6T0 577 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 GALNT6Q8NCL4 622 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 SOCS4Q8WXH5 440 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 ISOC1Q96CN7 298 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 COX4I2Q96KJ9 171 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 RANBP9Q96S59 729 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 LGMNQ99538 433 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 CGREF1Q99674 301 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 DUSP16Q9BY84 665 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 RHOBTB2Q9BYZ6 727 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 ZFYVE28Q9HCC9 887 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 CASS4Q9NQ75 786 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 ARMC1Q9NVT9 282 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.38□□□□□ -1.23
BEST3-212ENST00000553096 NCKIPSDQ9NZQ3 722 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 FZD10Q9ULW2 581 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PCDHGA7Q9Y5G6 932 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 SNX13Q9Y5W8 968 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 ZCWPW2A0A1B0GU75 182 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 KANSL1LA0AUZ9 987 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 NRP1O14786 923 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 TRIM24O15164 1050 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 NCAM2O15394 837 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 PSMD3O43242 534 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 MFSD11O43934 449 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 NOL3O60936 208 aaKnown RBP7.37□□□□□ -1.23
BEST3-212ENST00000553096 DUSP11O75319 330 aaKnown RBP7.37□□□□□ -1.23
BEST3-212ENST00000553096 SRP72O76094 671 aaKnown RBP7.37□□□□□ -1.23
BEST3-212ENST00000553096 ESRRBO95718 433 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 PTPN1P18031 435 aaKnown RBP7.37□□□□□ -1.23
BEST3-212ENST00000553096 CSRP3P50461 194 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 NDST2P52849 883 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 NME5P56597 212 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 PAFAH1B3Q15102 231 aaKnown RBP7.37□□□□□ -1.23
BEST3-212ENST00000553096 ZNF829Q3KNS6 432 aaPredicted RBP7.37□□□□□ -1.23
BEST3-212ENST00000553096 INTS11Q5TA45 600 aaKnown RBP7.37□□□□□ -1.23
BEST3-212ENST00000553096 SYPL2Q5VXT5 272 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 ITPRIPL1Q6GPH6 555 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 FAM45BPQ6NSW5 357 aa7.37□□□□□ -1.23
BEST3-212ENST00000553096 TTC33Q6PID6 262 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms