RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	VIPR1	P32241	457 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	HADHA	P40939	763 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	EIF3B	P55884	814 aa	Known RBP	11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	FAM193A	P78312	1265 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	PRAME	P78395	509 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	ZXDA	P98168	799 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	CASP8	Q14790	479 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	CRYM	Q14894	314 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	CRY1	Q16526	586 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	LONRF1	Q17RB8	773 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	POM121L1P	Q3SYA9	428 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	ANKRD20A4	Q4UJ75	823 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	STEAP4	Q687X5	459 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	KIAA1211L	Q6NV74	962 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	ERN2	Q76MJ5	926 aa	Known RBP	11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	SYT13	Q7L8C5	426 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	CROCCP2	Q86T23	111 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	TMEM135	Q86UB9	458 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	ZSWIM9	Q86XI8	627 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	TMPRSS6	Q8IU80	811 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	AGGF1	Q8N302	714 aa	eCLIP	11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	GANC	Q8TET4	914 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	CDKL2	Q92772	493 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	PBXIP1	Q96AQ6	731 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	OMD	Q99983	421 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	C19orf43	Q9BQ61	176 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	WDR83	Q9BRX9	315 aa	Known RBP	11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	IER2	Q9BTL4	223 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	HDAC8	Q9BY41	377 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	PPCS	Q9HAB8	311 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	ZFYVE1	Q9HBF4	777 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	SARDH	Q9UL12	918 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160	FAM169A	Q9Y6X4	670 aa		11.65	□□□□□ -0.54
CNOT2-223	ENST00000550160		A0A1W2PQF6	199 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	TCRBV21S2A2	A0A5A6	115 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	ANTXRL	A6NF34	631 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	MROH6	A6NGR9	719 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	MID1	O15344	667 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	LDB2	O43679	373 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	ALDH1A2	O94788	518 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	PRKCG	P05129	697 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	NUDT17	P0C025	328 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	ADRB3	P13945	408 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	TIMP2	P16035	220 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	SSTR1	P30872	391 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	HNF1B	P35680	557 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	HMGCL	P35914	325 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	MLLT3	P42568	568 aa	Predicted RBP	11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	MAGEA9	P43362	315 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	RPS14	P62263	151 aa	Known RBP	11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	SIGLEC14	Q08ET2	396 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	MSLN	Q13421	630 aa	Predicted RBP	11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	THOC5	Q13769	683 aa	Known RBP	11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	FRG1	Q14331	258 aa	Known RBP	11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	SLC29A2	Q14542	456 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	STAT4	Q14765	748 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	KLHL38	Q2WGJ6	581 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	ZDHHC20	Q5W0Z9	365 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	ALS2CL	Q60I27	953 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	PDPK2P	Q6A1A2	396 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	ZNF449	Q6P9G9	518 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160		Q6ZS52	159 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	CYS1	Q717R9	158 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	LYSMD3	Q7Z3D4	306 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	KBTBD6	Q86V97	674 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	IGDCC3	Q8IVU1	814 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	CNPY4	Q8N129	248 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	ZNF687	Q8N1G0	1237 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	PJA1	Q8NG27	643 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	CALML6	Q8TD86	181 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	VOPP1	Q96AW1	172 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	ARRDC3	Q96B67	414 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	ERLEC1	Q96DZ1	483 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	SIPA1	Q96FS4	1042 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	PKNOX2	Q96KN3	472 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	CYTH2	Q99418	400 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	FOXQ1	Q9C009	403 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	PCDH12	Q9NPG4	1184 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	PPAN	Q9NQ55	473 aa	Known RBP	11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	RAD18	Q9NS91	495 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	B4GALT6	Q9UBX8	382 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	PLAA	Q9Y263	795 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	NCKAP1	Q9Y2A7	1128 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	SPO11	Q9Y5K1	396 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	ARL5A	Q9Y689	179 aa		11.64	□□□□□ -0.55
CNOT2-223	ENST00000550160	EXOC1L	A0A1B0GW35	172 aa		11.63	□□□□□ -0.55
CNOT2-223	ENST00000550160	TCRBV9S1A1T	A0A576	114 aa		11.63	□□□□□ -0.55
CNOT2-223	ENST00000550160	CCDC78	A2IDD5	438 aa		11.63	□□□□□ -0.55
CNOT2-223	ENST00000550160	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.63	□□□□□ -0.55
CNOT2-223	ENST00000550160		H0Y858	1186 aa		11.63	□□□□□ -0.55
CNOT2-223	ENST00000550160	PSMD11	O00231	422 aa		11.63	□□□□□ -0.55
CNOT2-223	ENST00000550160	SLC7A4	O43246	635 aa		11.63	□□□□□ -0.55
CNOT2-223	ENST00000550160	RPP40	O75818	363 aa	Known RBP	11.63	□□□□□ -0.55
CNOT2-223	ENST00000550160	COL9A1	P20849	921 aa		11.63	□□□□□ -0.55
CNOT2-223	ENST00000550160	NMBR	P28336	390 aa		11.63	□□□□□ -0.55
CNOT2-223	ENST00000550160	MMP12	P39900	470 aa		11.63	□□□□□ -0.55
CNOT2-223	ENST00000550160	P2RY2	P41231	377 aa		11.63	□□□□□ -0.55
CNOT2-223	ENST00000550160	RPS9	P46781	194 aa	Known RBP	11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms