RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 COL4A2P08572 1712 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 EVPLQ92817 2033 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 CHD8Q9HCK8 2581 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 A0A087WZ62 844 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 A0A0U1RQF3 1178 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 LNP1A1A4G5 178 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 TMEM150BA6NC51 233 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 LINC01548A6NM66 108 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 A8MVJ9 347 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 H7C1Q1 480 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 SPRY2O43597 315 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 CYTH3O43739 400 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 EXTL3O43909 919 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 HBP1O60381 514 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 GCATO75600 419 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 EPN2O95208 641 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 CAVIN2O95810 425 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 PRKCGP05129 697 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 TMEM225BP0DP42 221 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 RXRAP19793 462 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 U2AF2P26368 475 aaKnown RBP eCLIP4.55□□□□□ -1.683e-6■■■■□ 23.8
CBX5-203ENST00000547872 DIO1P49895 249 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 RENBPP51606 427 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 GPC3P51654 580 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 ARPP19P56211 112 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 MRPS21P82921 87 aaKnown RBP4.55□□□□□ -1.68
CBX5-203ENST00000547872 LMAN2Q12907 356 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 SLC10A2Q12908 348 aaPredicted RBP4.55□□□□□ -1.68
CBX5-203ENST00000547872 ITGB3BPQ13352 177 aaPredicted RBP4.55□□□□□ -1.68
CBX5-203ENST00000547872 DRP2Q13474 957 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 HDAC1Q13547 482 aaPredicted RBP4.55□□□□□ -1.68
CBX5-203ENST00000547872 CLCA4Q14CN2 919 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 PON2Q15165 354 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 SLC5A9Q2M3M2 681 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 RNASE12Q5GAN4 147 aaKnown RBP4.55□□□□□ -1.68
CBX5-203ENST00000547872 PRAMEF17Q5VTA0 474 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 CATSPER4Q7RTX7 472 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 CACNA2D4Q7Z3S7 1137 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 RHPN2Q8IUC4 686 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 P3H2Q8IVL5 708 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 FAM186BQ8IYM0 893 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 METTL25Q8N6Q8 603 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 PNPLA1Q8N8W4 532 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 PNLDC1Q8NA58 520 aaKnown RBP4.55□□□□□ -1.68
CBX5-203ENST00000547872 CSGALNACT1Q8TDX6 532 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 ABHD5Q8WTS1 349 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 RILPL2Q969X0 211 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 WDYHV1Q96HA8 205 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 CDHR1Q96JP9 859 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 ZFYVE19Q96K21 471 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 GTPBP2Q9BX10 602 aaKnown RBP4.55□□□□□ -1.68
CBX5-203ENST00000547872 RNF41Q9H4P4 317 aaPredicted RBP4.55□□□□□ -1.68
CBX5-203ENST00000547872 TMEM9BQ9NQ34 198 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 ZDHHC7Q9NXF8 308 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 DACT1Q9NYF0 836 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 SEC63Q9UGP8 760 aaKnown RBP4.55□□□□□ -1.68
CBX5-203ENST00000547872 HES2Q9Y543 173 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 CACNA1IQ9P0X4 2223 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 DOCK8Q8NF50 2099 aa4.55□□□□□ -1.68
CBX5-203ENST00000547872 COL1A2P08123 1366 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 TPRP12270 2363 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 ZNF263O14978 683 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 RBMXL2O75526 392 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 NDST3O95803 873 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 CCNE2O96020 404 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 CHRNB1P11230 501 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 DARSP14868 501 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 FBLP22087 321 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 SFPQP23246 707 aaKnown RBP eCLIP4.54□□□□□ -1.68
CBX5-203ENST00000547872 ADRA1DP25100 572 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 TMOD1P28289 359 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 DHPSP49366 369 aaPredicted RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 COPB1P53618 953 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 C21orf58P58505 322 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 TUBA4AP68366 448 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 TXNL4AP83876 142 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 MIS18BP1Q6P0N0 1132 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 FUT10Q6P4F1 479 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 VITQ6UXI7 678 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 PLPPR4Q7Z2D5 763 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 ZNF575Q86XF7 245 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 KRT73Q86Y46 540 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 CCDC28AQ8IWP9 274 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 SEMA6DQ8NFY4 1073 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 DEPTORQ8TB45 409 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 CTHRC1Q96CG8 243 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 GRAMD1AQ96CP6 724 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 TCEAL4Q96EI5 215 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 HS6ST2Q96MM7 605 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 FYTTD1Q96QD9 318 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 GAD1Q99259 594 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 ELAC2Q9BQ52 826 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 TRMT61BQ9BVS5 477 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 PCDHAC1Q9H158 963 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 SLC32A1Q9H598 525 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 AGO4Q9HCK5 861 aaKnown RBP4.54□□□□□ -1.68
CBX5-203ENST00000547872 NLRC4Q9NPP4 1024 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 CHST12Q9NRB3 414 aa4.54□□□□□ -1.68
CBX5-203ENST00000547872 VPS45Q9NRW7 570 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms