RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CD248Q9HCU0 757 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 CHRAC1Q9NRG0 131 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 NINJ2Q9NZG7 142 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 NCKAP1Q9Y2A7 1128 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 PKP3Q9Y446 797 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 RPS6KL1Q9Y6S9 549 aa15.88■□□□□ 0.13
TRAFD1-203ENST00000547063 C1orf232A0A0U1RR37 186 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 TCRBV21S2A2A0A5A6 115 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 MROH6A6NGR9 719 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 MID1O15344 667 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 STX7O15400 261 aaKnown RBP15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 SLC7A4O43246 635 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 RIPK2O43353 540 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 LDB2O43679 373 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 ALPIP09923 528 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 PIRTP0C851 137 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 COL9A1P20849 921 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 STX2P32856 288 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 HMGCLP35914 325 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 HADHAP40939 763 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 POM121L1PQ3SYA9 428 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 ANKRD20A4Q4UJ75 823 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 TSTD2Q5T7W7 516 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 ZDHHC20Q5W0Z9 365 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 ZNF449Q6P9G9 518 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 TRIM67Q6ZTA4 783 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 C3orf62Q6ZUJ4 267 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 DPPA4Q7L190 304 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 IGDCC3Q8IVU1 814 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 AGGF1Q8N302 714 aaeCLIP15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 GSDMBQ8TAX9 411 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 ANKRD7Q92527 254 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 PBXIP1Q96AQ6 731 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 ZNF669Q96BR6 464 aaPredicted RBP15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 CFAP36Q96G28 342 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 NECAB3Q96P71 396 aaPredicted RBP15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 CCDC77Q9BR77 488 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 MKRN2Q9H000 416 aaKnown RBP15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 LRRC4CQ9HCJ2 640 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 PCDH12Q9NPG4 1184 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 RAD18Q9NS91 495 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 B4GALT6Q9UBX8 382 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 FZD4Q9ULV1 537 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 SPO11Q9Y5K1 396 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 FAM169AQ9Y6X4 670 aa15.87■□□□□ 0.13
TRAFD1-203ENST00000547063 A0A087WUV0 522 aaPredicted RBP15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 NPIPB15A6NHN6 443 aaPredicted RBP15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 H0Y858 1186 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 PSMD11O00231 422 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 NEMP1O14524 444 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 AP1G1O43747 822 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 ACSL3O95573 720 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 HSD17B3P37058 310 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 MMP12P39900 470 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 P2RY2P41231 377 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 PTPN5P54829 565 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 CNTN1Q12860 1018 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 CRYMQ14894 314 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 TMEM92Q6UXU6 159 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 UNC5AQ6ZN44 842 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 TTC30BQ8N4P2 665 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 HDDC3Q8N4P3 179 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 MDGA1Q8NFP4 955 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 TSTD1Q8NFU3 115 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 GANCQ8TET4 914 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 MRGPRX1Q96LB2 322 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 WDR83Q9BRX9 315 aaKnown RBP15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 CDH19Q9H159 772 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 NLE1Q9NVX2 485 aaPredicted RBP15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 KCTD5Q9NXV2 234 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 ARL5AQ9Y689 179 aa15.86■□□□□ 0.13
TRAFD1-203ENST00000547063 RGSL1A5PLK6 1076 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 AREL1O15033 823 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 TSPAN6O43657 245 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 RNASEH2AO75792 299 aaKnown RBP15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 PRKCGP05129 697 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 PSMA3P25788 255 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 DRD3P35462 400 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 ZNF140P52738 457 aaPredicted RBP15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 PRAMEP78395 509 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 ACVR1Q04771 509 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 LONRF1Q17RB8 773 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 TMEM52BQ4KMG9 183 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 LRRC66Q68CR7 880 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 PDPK2PQ6A1A2 396 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 KIAA0930Q6ICG6 404 aaPredicted RBP15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 CRTC1Q6UUV9 634 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 KIAA1324Q6UXG2 1013 aaKnown RBP15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 MAMSTRQ6ZN01 415 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 HDXQ7Z353 690 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 LYSMD3Q7Z3D4 306 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 CNPY4Q8N129 248 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 CAMKK1Q8N5S9 505 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 AADATQ8N5Z0 425 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 FLCNQ8NFG4 579 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 CDKL2Q92772 493 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 ERLEC1Q96DZ1 483 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 MFSD3Q96ES6 412 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms