RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 ATN1P54259 1190 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-209ENST00000545689 SULT2A1Q06520 285 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 TRIM25Q14258 630 aaKnown RBP12.55□□□□□ -0.4
COL4A6-209ENST00000545689 TRAPPC5Q8IUR0 188 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 PGAM4Q8N0Y7 254 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 C1orf127Q8N9H9 656 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 LEMD2Q8NC56 503 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 SLC9A7Q96T83 725 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 RPTORQ8N122 1335 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 AGPSO00116 658 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 PIGRP01833 764 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 NOS3P29474 1203 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 MC4RP32245 332 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 CCR3P51677 355 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 CDYL2Q8N8U2 506 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 DNAJB14Q8TBM8 379 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 ENKURQ8TC29 256 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 RRAGCQ9HB90 399 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 ASAH2Q9NR71 780 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 COL14A1Q05707 1796 aaKnown RBP12.55□□□□□ -0.4
COL4A6-209ENST00000545689 C1QTNF3-AMACRE9PGA6 284 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 UNGP13051 313 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-209ENST00000545689 L1CAMP32004 1257 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 DGKKQ5KSL6 1271 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 SMYD5Q6GMV2 418 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 SNX27Q96L92 541 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 BTRCQ9Y297 605 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 AK5Q9Y6K8 562 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 TCRBV7S2A1N4TA0A589 114 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 CST1P01037 141 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 WEE1P30291 646 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 TLX1P31314 330 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-209ENST00000545689 MTFMTQ96DP5 389 aaKnown RBP12.55□□□□□ -0.4
COL4A6-209ENST00000545689 SLC12A4Q9UP95 1085 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 HMGB3O15347 200 aaKnown RBP12.55□□□□□ -0.4
COL4A6-209ENST00000545689 HDCP19113 662 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 PPM1AP35813 382 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 NUMBP49757 651 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 RGS21Q2M5E4 152 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 LSM12Q3MHD2 195 aaKnown RBP12.55□□□□□ -0.4
COL4A6-209ENST00000545689 CERCAMQ5T4B2 595 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 ERICH5Q6P6B1 374 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 CMC1Q7Z7K0 106 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 NALCNQ8IZF0 1738 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 DLG5Q8TDM6 1919 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 SLC47A1Q96FL8 570 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 MYO19Q96H55 970 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 NUDT4Q9NZJ9 180 aa12.55□□□□□ -0.4
COL4A6-209ENST00000545689 C2CD4BA6NLJ0 364 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 M0R2N6 131 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 DHX15O43143 795 aaKnown RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 UMPSP11172 480 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 SCNN1AP37088 669 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 ACAP2Q15057 778 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 ANKS1BQ7Z6G8 1248 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 OFCC1Q8IZS5 231 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 STYXQ8WUJ0 223 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 FZD1Q9UP38 647 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 SAMD4AQ9UPU9 718 aaKnown RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 UBXN8O00124 270 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 FYNP06241 537 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 HSPA14Q0VDF9 509 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 FAM110CQ1W6H9 321 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 TRIM40Q6P9F5 258 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 PIGWQ7Z7B1 504 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 CDH22Q9UJ99 828 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 IKZF3Q9UKT9 509 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 ZNF232Q9UNY5 417 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 TCAF1Q9Y4C2 921 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 IRGMA1A4Y4 181 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 TLR5O60602 858 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 HNRNPLP14866 589 aaKnown RBP eCLIP12.54□□□□□ -0.42e-6■■■■□ 21.2
COL4A6-209ENST00000545689 CD52P31358 61 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 APTXQ7Z2E3 356 aaKnown RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 MCCC1Q96RQ3 725 aaPredicted RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 PRDM8Q9NQV8 689 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 KIAA1522Q9P206 1035 aaPredicted RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 H7C0S8 307 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 NPHS1O60500 1241 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 PARNO95453 639 aaKnown RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 CST3P01034 146 aaPredicted RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 LINC00032P0C843 101 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 GTF2E2P29084 291 aaKnown RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 GALNT3Q14435 633 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 CERS6Q6ZMG9 384 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 GCNT7Q6ZNI0 430 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 ST13P5Q8NFI4 369 aaPredicted RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 ZNF483Q8TF39 744 aaPredicted RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 LPPQ93052 612 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 C12orf42Q96LP6 360 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 COPS8Q99627 209 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 NMUR2Q9GZQ4 415 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 REXO4Q9GZR2 422 aaKnown RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 AGO3Q9H9G7 860 aaKnown RBP12.54□□□□□ -0.4
COL4A6-209ENST00000545689 ATRNL1Q5VV63 1379 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 A0A0J9YYE9 177 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 UGT2B11O75310 529 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 GJB1P08034 283 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 ALOX12P18054 663 aa12.54□□□□□ -0.4
COL4A6-209ENST00000545689 MAPKAPK2P49137 400 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms