RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 RND1Q92730 232 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 ELP4Q96EB1 424 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 TTC14Q96N46 770 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 SIN3AQ96ST3 1273 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 PYM1Q9BRP8 204 aaKnown RBP4.69□□□□□ -1.66
SNHG1-224ENST00000545688 C17orf75Q9HAS0 396 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 KIAA1456Q9P272 454 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 ZNF711Q9Y462 761 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 PCDHGB3Q9Y5G1 929 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 DNMBPQ6XZF7 1577 aa4.69□□□□□ -1.66
SNHG1-224ENST00000545688 TDRD9Q8NDG6 1382 aaKnown RBP4.68□□□□□ -1.66
SNHG1-224ENST00000545688 TOP2AP11388 1531 aaKnown RBP4.68□□□□□ -1.66
SNHG1-224ENST00000545688 P2RY10O00398 339 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 TCEA3O75764 348 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 LDHAP00338 332 aaKnown RBP4.68□□□□□ -1.66
SNHG1-224ENST00000545688 ETFAP13804 333 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 MCM3P25205 808 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 PHEXP78562 749 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 SLC20A2Q08357 652 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 GRIK3Q13003 919 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 MAP3K21Q5TCX8 1036 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 PMS2CLQ68D20 193 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 FBXL22Q6P050 247 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-224ENST00000545688 TADA2BQ86TJ2 420 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 PLD5Q8N7P1 536 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 SCCPDHQ8NBX0 429 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 AGBL3Q8NEM8 1001 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 LRRC8CQ8TDW0 803 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 KXD1Q9BQD3 176 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 HAUS8Q9BT25 410 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 CNGB3Q9NQW8 809 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 TINAGQ9UJW2 476 aa4.68□□□□□ -1.66
SNHG1-224ENST00000545688 MAGI1Q96QZ7 1491 aaPredicted RBP4.68□□□□□ -1.66
SNHG1-224ENST00000545688 FAM172BPA6NC97 362 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 BCAT2O15382 392 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-224ENST00000545688 PAK4O96013 591 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-224ENST00000545688 ANOS1P23352 680 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 EIF2S3P41091 472 aaKnown RBP4.67□□□□□ -1.66
SNHG1-224ENST00000545688 DMP1Q13316 513 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-224ENST00000545688 TDGQ13569 410 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 VEPH1Q14D04 833 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 TAF11Q15544 211 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 SYT16Q17RD7 645 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 ANKRD54Q6NXT1 300 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 MTSS1LQ765P7 747 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 TRMT1LQ7Z2T5 733 aaKnown RBP4.67□□□□□ -1.66
SNHG1-224ENST00000545688 SLC9B2Q86UD5 537 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 FOXRED2Q8IWF2 684 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 ODF3L1Q8IXM7 274 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 KCNH5Q8NCM2 988 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 TMEM255BQ8WV15 326 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 FBXL8Q96CD0 374 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 ZNF570Q96NI8 536 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 RPS6KC1Q96S38 1066 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 TTYH1Q9H313 450 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-224ENST00000545688 ESRP2Q9H6T0 727 aaKnown RBP4.67□□□□□ -1.66
SNHG1-224ENST00000545688 ZFP57Q9NU63 452 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 CCDC88BA6NC98 1476 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 SNAPC4Q5SXM2 1469 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 RAD54L2Q9Y4B4 1467 aa4.67□□□□□ -1.66
SNHG1-224ENST00000545688 C16orf97H3BN30 126 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 ATP1A1P05023 1023 aaKnown RBP4.66□□□□□ -1.66
SNHG1-224ENST00000545688 MMP2P08253 660 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 CETPP11597 493 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 MARK3P27448 753 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 POU1F1P28069 291 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 EFNA5P52803 228 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 EFNB1P98172 346 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 RELQ04864 619 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-224ENST00000545688 ACCSLQ4AC99 568 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 SGO1Q5FBB7 561 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 ATG16L1Q676U5 607 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 BBS12Q6ZW61 710 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 TNIP2Q8NFZ5 429 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 OR13A1Q8NGR1 328 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 USP13Q92995 863 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-224ENST00000545688 BBS4Q96RK4 519 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 ARPC5LQ9BPX5 153 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 CSTL1Q9H114 145 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 RCOR1Q9UKL0 485 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 HSF4Q9ULV5 492 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.66□□□□□ -1.66
SNHG1-224ENST00000545688 SYNJ2O15056 1496 aa4.66□□□□□ -1.66
SNHG1-224ENST00000545688 SYNJ1O43426 1573 aa4.65□□□□□ -1.66
SNHG1-224ENST00000545688 WDR97A6NE52 1622 aa4.65□□□□□ -1.66
SNHG1-224ENST00000545688 SOGA1O94964 1423 aa4.65□□□□□ -1.66
SNHG1-224ENST00000545688 FGF17O60258 216 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 SLC22A3O75751 556 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 URODP06132 367 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 HEXAP06865 529 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 CYC1P08574 325 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 CFC1BP0CG36 223 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 CFC1P0CG37 223 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 G6PDP11413 515 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 CDH1P12830 882 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 HLA-DOBP13765 273 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 AGAP20933 346 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 GPD2P43304 727 aa4.65□□□□□ -1.67
SNHG1-224ENST00000545688 CRIP2P52943 208 aaPredicted RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms