RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 TMEM47Q9BQJ4 181 aa3.65□□□□□ -1.83
GTF2H3-209ENST00000542279 POLDIP3Q9BY77 421 aaKnown RBP3.65□□□□□ -1.83
GTF2H3-209ENST00000542279 RANGRFQ9HD47 186 aaPredicted RBP3.65□□□□□ -1.83
GTF2H3-209ENST00000542279 DDX4Q9NQI0 724 aaKnown RBP3.65□□□□□ -1.83
GTF2H3-209ENST00000542279 ANKRD10Q9NXR5 420 aa3.65□□□□□ -1.83
GTF2H3-209ENST00000542279 CNOT8Q9UFF9 292 aaKnown RBP3.65□□□□□ -1.83
GTF2H3-209ENST00000542279 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.65□□□□□ -1.83
GTF2H3-209ENST00000542279 ZMYM2Q9UBW7 1377 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 SYNDIG1LA6NDD5 238 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 FAM90A8PA6NJQ4 464 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 A8MV72 311 aaPredicted RBP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 ERVV-2B6SEH9 535 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 MDM4O15151 490 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 P4HA2O15460 535 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 ZC3H11AO75152 810 aaKnown RBP eCLIP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 CNOT3O75175 753 aaKnown RBP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 BEST1O76090 585 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 FAM90A13PP0C7W8 464 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 FAM90A24PP0C7X0 464 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 ENO3P13929 434 aaPredicted RBP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 ZNF182P17025 639 aaPredicted RBP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 GABRB1P18505 474 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 CCKARP32238 428 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 MRPL12P52815 198 aaKnown RBP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 PSMC6P62333 389 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 FAM27E3Q08E93 113 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 SOWAHAQ2M3V2 549 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 PLEKHS1Q5SXH7 462 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 AWAT2Q6E213 333 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 SHC4Q6S5L8 630 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 GLDNQ6ZMI3 551 aaPredicted RBP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 TICAM1Q8IUC6 712 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 SFTPA2Q8IWL1 248 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 MB21D2Q8IYB1 491 aaPredicted RBP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 TMEM199Q8N511 208 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 LSMEM1Q8N8F7 131 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 C1orf131Q8NDD1 294 aaKnown RBP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 GPT2Q8TD30 523 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 TMEM174Q8WUU8 243 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 SLC35F5Q8WV83 523 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 SNRNP27Q8WVK2 155 aaKnown RBP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 ERGIC1Q969X5 290 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 HMCESQ96FZ2 354 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 NCAPGQ9BPX3 1015 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 WDR77Q9BQA1 342 aaPredicted RBP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 SRSF8Q9BRL6 282 aaKnown RBP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 C1QTNF5Q9BXJ0 243 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 IFIH1Q9BYX4 1025 aaKnown RBP3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 TASP1Q9H6P5 420 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 PLSCR4Q9NRQ2 329 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 CYSLTR2Q9NS75 346 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 SETD4Q9NVD3 440 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 NKIRAS2Q9NYR9 191 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 PCDHA12Q9UN75 941 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 MAU2Q9Y6X3 613 aa3.64□□□□□ -1.83
GTF2H3-209ENST00000542279 TTC3P53804 2025 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 IGKV2D-30A0A075B6S6 120 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 TMEM272A0A1B0GTI8 110 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 FAM237AA0A1B0GTK4 181 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 KDM4EB2RXH2 506 aaPredicted RBP3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 ZNF814B7Z6K7 855 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 HS6ST1O60243 411 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 ZNF500O60304 480 aaPredicted RBP3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 MTA2O94776 668 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 NDUFB8O95169 186 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 PGM3O95394 542 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 DNTTP04053 509 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 MMP2P08253 660 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 AGAP20933 346 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 RRM1P23921 792 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 NNMTP40261 264 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 SLC15A1P46059 708 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 P2RX3P56373 397 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 SSBP2P81877 361 aaPredicted RBP3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 ACSM2AQ08AH3 577 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 AIMP2Q13155 320 aaKnown RBP3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 NAE1Q13564 534 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 LAMB3Q13751 1172 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 BECN1Q14457 450 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 MMEL1Q495T6 779 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 RAB41Q5JT25 222 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 C6orf141Q5SZD1 244 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 C10orf25Q5T742 122 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 ACSM2BQ68CK6 577 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 KRBA2Q6ZNG9 492 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 CLEC17AQ6ZS10 378 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 SEPT14Q6ZU15 432 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 TRILQ7L0X0 811 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 TRAPPC11Q7Z392 1133 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 TECPR1Q7Z6L1 1165 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 HAPLN4Q86UW8 402 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 ZDHHC17Q8IUH5 632 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 SAMD14Q8IZD0 417 aaPredicted RBP3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 RBFAQ8N0V3 343 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 ENGASEQ8NFI3 743 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 BEST2Q8NFU1 509 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 BICD2Q8TD16 824 aa3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 MSI2Q96DH6 328 aaKnown RBP3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 SAT2Q96F10 170 aaPredicted RBP3.63□□□□□ -1.83
GTF2H3-209ENST00000542279 RRNAD1Q96FB5 475 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms