RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 SEPT10Q9P0V9 454 aa13.81□□□□□ -0.2
TNFSF13B-206ENST00000542136 CHKBQ9Y259 395 aa13.81□□□□□ -0.2
TNFSF13B-206ENST00000542136 FNDC3AQ9Y2H6 1198 aaKnown RBP13.81□□□□□ -0.2
TNFSF13B-206ENST00000542136 ZKSCAN5Q9Y2L8 839 aa13.81□□□□□ -0.2
TNFSF13B-206ENST00000542136 JRKLQ9Y4A0 524 aa13.81□□□□□ -0.2
TNFSF13B-206ENST00000542136 TTLL3Q9Y4R7 772 aa13.81□□□□□ -0.2
TNFSF13B-206ENST00000542136 LOC285095A0A1B0GVY8 99 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 RGSL1A5PLK6 1076 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 CAPN8A6NHC0 703 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 RECQL5O94762 991 aaPredicted RBP13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 PTMAP06454 111 aaKnown RBP13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 RBL1P28749 1068 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 STIP1P31948 543 aaKnown RBP13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 CD68P34810 354 aaPredicted RBP13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 HNF1BP35680 557 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 CDK18Q07002 472 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 DPTQ07507 201 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 ZNF211Q13398 564 aaPredicted RBP13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 MTM1Q13496 603 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 ARHGEF7Q14155 803 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 WSCD2Q2TBF2 565 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 INAVAQ3KP66 663 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 UAP1L1Q3KQV9 507 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 SEL1L2Q5TEA6 688 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 ITPRIPL1Q6GPH6 555 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 CCDC70Q6NSX1 233 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 AADACL2Q6P093 401 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 ZNF765Q7L2R6 523 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 REXO1L1PQ8IX06 675 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 NRSN1Q8IZ57 195 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 ZNF567Q8N184 647 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 SLC35B2Q8TB61 432 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 MAIP1Q8WWC4 291 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 TBATAQ96M53 351 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 RBM15Q96T37 977 aaKnown RBP eCLIP13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 MLPHQ9BV36 600 aaPredicted RBP13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 CDH19Q9H159 772 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 IL21RQ9HBE5 538 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 MAGEE1Q9HCI5 957 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 FAM153AQ9UHL3 310 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 SPTBN4Q9H254 2564 aa13.8□□□□□ -0.2
TNFSF13B-206ENST00000542136 C5orf60A6NFR6 353 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 NPIPB15A6NHN6 443 aaPredicted RBP13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 ANXA9O76027 345 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 NDST3O95803 873 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 PYGLP06737 847 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 MSNP26038 577 aaKnown RBP13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 IGFALSP35858 605 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 GRK6P43250 576 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 CLDN2P57739 230 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 FOXK2Q01167 660 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 PTSQ03393 145 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 MPP3Q13368 585 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 CNGA3Q16281 694 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 ESRP1Q6NXG1 681 aaKnown RBP13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 DARS2Q6PI48 645 aaKnown RBP13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 CRTC1Q6UUV9 634 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 LAYNQ6UX15 382 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 DGLUCYQ7Z3D6 616 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 TECPR1Q7Z6L1 1165 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 GLRX5Q86SX6 157 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 SLC13A5Q86YT5 568 aaPredicted RBP13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 SLC22A18ASQ8N1D0 253 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 OR2I1PQ8NGU4 316 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 ATL2Q8NHH9 583 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 SAP25Q8TEE9 199 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 CDC6Q99741 560 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 GBA3Q9H227 469 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 KCNF1Q9H3M0 494 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 FZD3Q9NPG1 666 aa13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 MBNL1Q9NR56 388 aaKnown RBP13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 KLHL8Q9P2G9 620 aaPredicted RBP13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 AAR2Q9Y312 384 aaKnown RBP13.79□□□□□ -0.2
TNFSF13B-206ENST00000542136 DCDC2BA2VCK2 349 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 PDE2AO00408 941 aaPredicted RBP13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 TNFRSF10CO14798 259 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 CBFA2T3O75081 653 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 GCATO75600 419 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 KCNK5O95279 499 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 CSF2P04141 144 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 PRKCGP05129 697 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 GM2AP17900 193 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 LHCGRP22888 699 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 THOP1P52888 689 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 HNRNPKP61978 463 aaKnown RBP eCLIP13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 FZD2Q14332 565 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 INPP5AQ14642 412 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 ACOX1Q15067 660 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 IRF4Q15306 451 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 SHBQ15464 509 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 CDKN3Q16667 212 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 QPCTQ16769 361 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 ANKRD20A2Q5SQ80 823 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 ANKRD20A1Q5TYW2 823 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 ANKRD20A3Q5VUR7 823 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 PNCKQ6P2M8 343 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 DRICH1Q6PGQ1 229 aaPredicted RBP13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 MACC1Q6ZN28 852 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 B4GALNT4Q76KP1 1039 aa13.78□□□□□ -0.2
TNFSF13B-206ENST00000542136 KANSL1Q7Z3B3 1105 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms