RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 TYROBPO43914 113 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 SNUPNO95149 360 aaKnown RBP8.72□□□□□ -1.01
THBS3-210ENST00000541576 LAMP2P13473 410 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 IGFBP4P22692 258 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 LTBRP36941 435 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 GP5P40197 560 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 ARCN1P48444 511 aaKnown RBP8.72□□□□□ -1.01
THBS3-210ENST00000541576 RGS19P49795 217 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 BCL2L1Q07817 233 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 ADGRE1Q14246 886 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 DLG2Q15700 870 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 SLC30A9Q6PML9 568 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 CAMK1DQ8IU85 385 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 ETFBKMTQ8IXQ9 262 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 PCDH20Q8N6Y1 951 aaKnown RBP8.72□□□□□ -1.01
THBS3-210ENST00000541576 DENND1AQ8TEH3 1009 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 WFIKKN2Q8TEU8 576 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 MTBPQ96DY7 904 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 CIPCQ9C0C6 399 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 C12orf65Q9H3J6 166 aaKnown RBP8.72□□□□□ -1.01
THBS3-210ENST00000541576 KCTD3Q9Y597 815 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
THBS3-210ENST00000541576 LDB2O43679 373 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 BNIP3LO60238 219 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 FZD6O60353 706 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 RFPL1O75677 317 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 GSRP00390 522 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 PSMC3P17980 439 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 CNTFP26441 200 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 RPA3P35244 121 aaPredicted RBP8.71□□□□□ -1.01
THBS3-210ENST00000541576 EPHB1P54762 984 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 WDR4P57081 412 aaKnown RBP8.71□□□□□ -1.01
THBS3-210ENST00000541576 THOC5Q13769 683 aaKnown RBP8.71□□□□□ -1.01
THBS3-210ENST00000541576 GRM2Q14416 872 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 ARMC12Q5T9G4 340 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 PAF1Q8N7H5 531 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 CENPTQ96BT3 561 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 MYO19Q96H55 970 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 MSLNLQ96KJ4 702 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 KXD1Q9BQD3 176 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 POMKQ9H5K3 350 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 ATP13A3Q9H7F0 1226 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 HPS4Q9NQG7 708 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 DLGAP2Q9P1A6 1054 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 ERVW-1Q9UQF0 538 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 SLC27A6Q9Y2P4 619 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 ARL5AQ9Y689 179 aa8.71□□□□□ -1.01
THBS3-210ENST00000541576 A0A1W2PPC1 479 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 FAM47DPA6NHR8 397 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 PGLSO95336 258 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 PIGNO95427 931 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 CRTAMO95727 393 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 ATP5BP06576 529 aaKnown RBP8.71□□□□□ -1.02
THBS3-210ENST00000541576 PYGBP11216 843 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 BMP1P13497 986 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 GKP32189 559 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 NNMTP40261 264 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 ABL2P42684 1182 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 ABCG1P45844 678 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 PTPRRQ15256 657 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 GRTP1Q5TC63 336 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 RNF220Q5VTB9 566 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 STRA8Q7Z7C7 330 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 CPA6Q8N4T0 437 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 BANPQ8N9N5 519 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 OR13J1Q8NGT2 312 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 CYB5D2Q8WUJ1 264 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 SORCS1Q8WY21 1168 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 MYLIPQ8WY64 445 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 PEX13Q92968 403 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 ELSPBP1Q96BH3 223 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 PLA2G2FQ9BZM2 168 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 NSMCE4AQ9NXX6 385 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 DEC1Q9P2X7 70 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 NKX1-2Q9UD57 310 aaPredicted RBP8.71□□□□□ -1.02
THBS3-210ENST00000541576 SMG5Q9UPR3 1016 aaKnown RBP8.71□□□□□ -1.02
THBS3-210ENST00000541576 SPO11Q9Y5K1 396 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 UNC80Q8N2C7 3258 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 PRPF4O43172 522 aaKnown RBP eCLIP8.71□□□□□ -1.02
THBS3-210ENST00000541576 SOCS5O75159 536 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 DNAJC8O75937 253 aaPredicted RBP8.71□□□□□ -1.02
THBS3-210ENST00000541576 ASLP04424 464 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 DLDP09622 509 aaKnown RBP8.71□□□□□ -1.02
THBS3-210ENST00000541576 NEFHP12036 1026 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 POU3F3P20264 500 aaPredicted RBP8.71□□□□□ -1.02
THBS3-210ENST00000541576 SERPINA4P29622 427 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 SLC6A11P48066 632 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 NCALDP61601 193 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 SLC18A2Q05940 514 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 PTPRCAPQ14761 206 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 MYLK3Q32MK0 819 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 CARD16Q5EG05 197 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 GRAMD4Q6IC98 578 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 PARM1Q6UWI2 310 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 GLT6D1Q7Z4J2 308 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 FGF14Q92915 247 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 PTPRN2Q92932 1015 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 KDM4CQ9H3R0 1056 aa8.71□□□□□ -1.02
THBS3-210ENST00000541576 PAPOLBQ9NRJ5 636 aaKnown RBP8.71□□□□□ -1.02
THBS3-210ENST00000541576 SLC8A2Q9UPR5 921 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms