RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 CRTC1Q6UUV9 634 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 LAYNQ6UX15 382 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 GSTA5Q7RTV2 222 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 ZSCAN30Q86W11 494 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 KLHDC8BQ8IXV7 354 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 SLC25A41Q8N5S1 370 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 C12orf50Q8NA57 414 aaPredicted RBP12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 TCEAL3Q969E4 200 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 PCDH15Q96QU1 1955 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 FICDQ9BVA6 458 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 FSCN3Q9NQT6 498 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 AASDHPPTQ9NRN7 309 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 SEMA4GQ9NTN9 838 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 SUSD2Q9UGT4 822 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 SCN8AQ9UQD0 1980 aa12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 AAR2Q9Y312 384 aaKnown RBP12.75□□□□□ -0.37
TSPAN9-207ENST00000539631 GOLGA6L10A0A0M3HER8 536 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 PRAMEF26H0Y7S4 382 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 PDE2AO00408 941 aaPredicted RBP12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 AGTP01019 485 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 WNT1P04628 370 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 CFIP05156 583 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 ATXN1LP0C7T5 689 aaKnown RBP12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 ZNF806P0C7X5 589 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 PIRTP0C851 137 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 TGM1P22735 817 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 AKT2P31751 481 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 HOXD12P35452 270 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 ACTN2P35609 894 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 CLDN2P57739 230 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 RACK1P63244 317 aaKnown RBP12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 ARHGEF7Q14155 803 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 SPARCL1Q14515 664 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 ACOX1Q15067 660 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 SF3A2Q15428 464 aaKnown RBP12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 CDKN3Q16667 212 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 TRIM61Q5EBN2 209 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 SIRPB2Q5JXA9 342 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 LRRC66Q68CR7 880 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 CCDC70Q6NSX1 233 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 SLC23A3Q6PIS1 610 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 CCDC137Q6PK04 289 aaKnown RBP12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 CCDC89Q8N998 374 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 TP53I13Q8NBR0 393 aaPredicted RBP12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 ATL2Q8NHH9 583 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 CEP76Q8TAP6 659 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 ASB12Q8WXK4 309 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 PPP1R2P1Q96PQ5 205 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 LENG8Q96PV6 779 aaPredicted RBP12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 KLF6Q99612 283 aaPredicted RBP12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 APOL2Q9BQE5 337 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 ETNK1Q9HBU6 452 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 PAK5Q9P286 719 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 SLC6A14Q9UN76 642 aa12.74□□□□□ -0.37
TSPAN9-207ENST00000539631 SDK1Q7Z5N4 2213 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 PI4KAP42356 2102 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 A0A1W2PR77 199 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 PRR5-ARHGAP8B1AHC4 643 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 H0Y8X5 98 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 KHNYNO15037 678 aaKnown RBP12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 LRP3O75074 770 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 USP12O75317 370 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 RECQL5O94762 991 aaPredicted RBP12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 CLDN7O95471 211 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 EPOP01588 193 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 C1SP09871 688 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 CD38P28907 300 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 ADRA1AP35348 466 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 IGFALSP35858 605 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 PAFAH1B1P43034 410 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 TNNT3P45378 269 aaPredicted RBP12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 CSNK1EP49674 416 aaKnown RBP12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 AFF3P51826 1226 aaKnown RBP12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 IRX4P78413 519 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 PTSQ03393 145 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 STAT4Q14765 748 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 TRIP13Q15645 432 aaPredicted RBP12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 SLC1A5Q15758 541 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 CSRP2Q16527 193 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 KCTD11Q693B1 232 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 KDM7AQ6ZMT4 941 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 GCNT7Q6ZNI0 430 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 RFLNAQ6ZTI6 216 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 HSD11B1LQ7Z5J1 315 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 RABEPKQ7Z6M1 372 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 CBARPQ8N350 705 aaPredicted RBP12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 PDCD7Q8N8D1 485 aaKnown RBP12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 TMEM145Q8NBT3 493 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 CENPTQ96BT3 561 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 BMFQ96LC9 184 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 COQ10AQ96MF6 247 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 LYSMD1Q96S90 227 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 TBL1YQ9BQ87 522 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 FSD1LQ9BXM9 530 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 DDX47Q9H0S4 455 aaKnown RBP12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 CAPN10Q9HC96 672 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 MBNL1Q9NR56 388 aaKnown RBP12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 SPO11Q9Y5K1 396 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 CACNA1HO95180 2353 aa12.73□□□□□ -0.37
TSPAN9-207ENST00000539631 C1orf232A0A0U1RR37 186 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms