RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 BRAT1Q6PJG6 821 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 PARS2Q7L3T8 475 aaKnown RBP14.19□□□□□ -0.14
CD4-208ENST00000538827 CCNJLQ8IV13 435 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.19□□□□□ -0.14
CD4-208ENST00000538827 OR2W6PQ8NHA6 318 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 GSDMBQ8TAX9 411 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 FBF1Q8TES7 1133 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 ARRDC3Q96B67 414 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 ECHDC3Q96DC8 303 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 PPP1R16AQ96I34 528 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 SHDQ96IW2 340 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 RANBP9Q96S59 729 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 GPR63Q9BZJ6 419 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 EPB41L4BQ9H329 900 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 MRM3Q9HC36 420 aaKnown RBP14.19□□□□□ -0.14
CD4-208ENST00000538827 CHRAC1Q9NRG0 131 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 POLR3BQ9NW08 1133 aaPredicted RBP14.19□□□□□ -0.14
CD4-208ENST00000538827 ZNF446Q9NWS9 450 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 MRPS17Q9Y2R5 130 aaKnown RBP14.19□□□□□ -0.14
CD4-208ENST00000538827 ARL5AQ9Y689 179 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 CHD8Q9HCK8 2581 aa14.19□□□□□ -0.14
CD4-208ENST00000538827 DNAH14Q0VDD8 3507 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 A0A0J9YYE9 177 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 C1orf232A0A0U1RR37 186 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 FAM237BA0A1B0GVD1 139 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 TSPAN11A1L157 253 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 KRBA1A5PL33 1030 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 C16orf96A6NNT2 1141 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 A8MX80 341 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 PLK4O00444 970 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 STK25O00506 426 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 USP1O94782 785 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 TRBC1P01850 177 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 ABHD2P08910 425 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 GSTA2P09210 222 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 CHRM1P11229 460 aaPredicted RBP14.18□□□□□ -0.14
CD4-208ENST00000538827 CYP2A6P11509 494 aaPredicted RBP14.18□□□□□ -0.14
CD4-208ENST00000538827 TSHRP16473 764 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 ITGB7P26010 798 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 TARSP26639 723 aaKnown RBP14.18□□□□□ -0.14
CD4-208ENST00000538827 CAMK2GQ13555 558 aaPredicted RBP14.18□□□□□ -0.14
CD4-208ENST00000538827 LAMB3Q13751 1172 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 ENPP2Q13822 863 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 CCINQ13939 588 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 EFTUD2Q15029 972 aaKnown RBP eCLIP14.18□□□□□ -0.14
CD4-208ENST00000538827 TSTD2Q5T7W7 516 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 STEAP4Q687X5 459 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 ZNF776Q68DI1 518 aaPredicted RBP14.18□□□□□ -0.14
CD4-208ENST00000538827 KIAA1211LQ6NV74 962 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 Q6ZS52 159 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 C3orf62Q6ZUJ4 267 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 LYSMD3Q7Z3D4 306 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 OTUD6BQ8N6M0 293 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 TMIEQ8NEW7 156 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 FLCNQ8NFG4 579 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 OR2T3Q8NH03 318 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 KCNV2Q8TDN2 545 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 PTCD2Q8WV60 388 aaKnown RBP14.18□□□□□ -0.14
CD4-208ENST00000538827 MRRFQ96E11 262 aaKnown RBP14.18□□□□□ -0.14
CD4-208ENST00000538827 MFSD3Q96ES6 412 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 DNAJC1Q96KC8 554 aaKnown RBP14.18□□□□□ -0.14
CD4-208ENST00000538827 ZIM3Q96PE6 472 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 GABRG3Q99928 467 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 KIFC1Q9BW19 673 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 FOXQ1Q9C009 403 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 ACBD3Q9H3P7 528 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 LTB4R2Q9NPC1 389 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 PPANQ9NQ55 473 aaKnown RBP14.18□□□□□ -0.14
CD4-208ENST00000538827 IL1RAPL1Q9NZN1 696 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 HACD3Q9P035 362 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 WNT16Q9UBV4 365 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 SLC2A6Q9UGQ3 507 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 SARDHQ9UL12 918 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 FNDC3AQ9Y2H6 1198 aaKnown RBP14.18□□□□□ -0.14
CD4-208ENST00000538827 KCTD3Q9Y597 815 aa14.18□□□□□ -0.14
CD4-208ENST00000538827 ZNF106Q9H2Y7 1883 aaKnown RBP14.18□□□□□ -0.14
CD4-208ENST00000538827 A0A0U1RQS6 177 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 EXOC1LA0A1B0GW35 172 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 MAGEB16A2A368 324 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 NPIPB15A6NHN6 443 aaPredicted RBP14.17□□□□□ -0.14
CD4-208ENST00000538827 C2orf81A6NN90 581 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 CCL22O00626 93 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 AURKAO14965 403 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 ADAM23O75077 832 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 SHBGP04278 402 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 PAMP19021 973 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 NFKBIAP25963 317 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 VIPR1P32241 457 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 HNF1BP35680 557 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 NEK3P51956 506 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 POLR2LP62875 67 aaKnown RBP14.17□□□□□ -0.14
CD4-208ENST00000538827 CBLBQ13191 982 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 TAF1AQ15573 450 aaPredicted RBP14.17□□□□□ -0.14
CD4-208ENST00000538827 CST6Q15828 149 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 ANKRD20A4Q4UJ75 823 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 FAM46CQ5VWP2 391 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 ESRP1Q6NXG1 681 aaKnown RBP14.17□□□□□ -0.14
CD4-208ENST00000538827 ERAP2Q6P179 960 aa14.17□□□□□ -0.14
CD4-208ENST00000538827 TRMT10BQ6PF06 316 aaKnown RBP14.17□□□□□ -0.14
CD4-208ENST00000538827 KIAA1324Q6UXG2 1013 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms