RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 CLSTN3Q9BQT9 956 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 CWH43Q9H720 699 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 TNFRSF12AQ9NP84 129 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 CORO1CQ9ULV4 474 aaPredicted RBP14.05□□□□□ -0.16
LIMK1-208ENST00000538333 CRYL1Q9Y2S2 319 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 PQBP1O60828 265 aaKnown RBP14.05□□□□□ -0.16
LIMK1-208ENST00000538333 FKBP6O75344 327 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 CLDN11O75508 207 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 ALDH7A1P49419 539 aaKnown RBP14.05□□□□□ -0.16
LIMK1-208ENST00000538333 SUOXP51687 545 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 EPHB1P54762 984 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 MTTPP55157 894 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 GALNT1Q10472 559 aaPredicted RBP14.05□□□□□ -0.16
LIMK1-208ENST00000538333 TBL3Q12788 808 aaKnown RBP14.05□□□□□ -0.16
LIMK1-208ENST00000538333 ILF2Q12905 390 aaKnown RBP14.05□□□□□ -0.16
LIMK1-208ENST00000538333 AAGABQ6PD74 315 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 SNX32Q86XE0 403 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 BBS5Q8N3I7 341 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 RP9Q8TA86 221 aaKnown RBP14.05□□□□□ -0.16
LIMK1-208ENST00000538333 IGSF21Q96ID5 467 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 MYRFLQ96LU7 910 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 NACA2Q9H009 215 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 ZBTB26Q9HCK0 441 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 UBA2Q9UBT2 640 aaPredicted RBP14.05□□□□□ -0.16
LIMK1-208ENST00000538333 AFF4Q9UHB7 1163 aaKnown RBP14.05□□□□□ -0.16
LIMK1-208ENST00000538333 ANGPTL2Q9UKU9 493 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 PPM1HQ9ULR3 514 aa14.05□□□□□ -0.16
LIMK1-208ENST00000538333 ILVBLA1L0T0 632 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 TRPC5OSA6NMA1 111 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 ABLIM3O94929 683 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 OGNP20774 298 aaKnown RBP14.04□□□□□ -0.16
LIMK1-208ENST00000538333 CORO1AP31146 461 aaKnown RBP14.04□□□□□ -0.16
LIMK1-208ENST00000538333 ZNF140P52738 457 aaPredicted RBP14.04□□□□□ -0.16
LIMK1-208ENST00000538333 PLK1P53350 603 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 CCL23P55773 120 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 AP2B1P63010 937 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 SATB1Q01826 763 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 CCNIQ14094 377 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 TYSND1Q2T9J0 566 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 MRNIPQ6NTE8 343 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 RPS27LQ71UM5 84 aaKnown RBP14.04□□□□□ -0.16
LIMK1-208ENST00000538333 SLC22A9Q8IVM8 553 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 FBXW8Q8N3Y1 598 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 PTERQ96BW5 349 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 CATSPER2Q96P56 530 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 CINPQ9BW66 212 aaPredicted RBP14.04□□□□□ -0.16
LIMK1-208ENST00000538333 UNC93B1Q9H1C4 597 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 GSTO2Q9H4Y5 243 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 GKN1Q9NS71 199 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 POLR3BQ9NW08 1133 aaPredicted RBP14.04□□□□□ -0.16
LIMK1-208ENST00000538333 POMPQ9Y244 141 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 SPO11Q9Y5K1 396 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 PLXNA4Q9HCM2 1894 aa14.04□□□□□ -0.16
LIMK1-208ENST00000538333 LUC7L3O95232 432 aaKnown RBP14.03□□□□□ -0.16
LIMK1-208ENST00000538333 PENKP01210 267 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-208ENST00000538333 PRLP01236 227 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 HOXB8P17481 243 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-208ENST00000538333 PSMA3P25788 255 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 STC1P52823 247 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 OXCT1P55809 520 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 RFTN1Q14699 578 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-208ENST00000538333 HERC3Q15034 1050 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.03□□□□□ -0.16
LIMK1-208ENST00000538333 CHST9Q7L1S5 443 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 ADGRG6Q86SQ4 1221 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 SETD3Q86TU7 594 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-208ENST00000538333 HPS6Q86YV9 775 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 PELI3Q8N2H9 469 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 OR4L1Q8NH43 312 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 ZNF461Q8TAF7 563 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 ZNF296Q8WUU4 475 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-208ENST00000538333 WBP2Q969T9 261 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 CDKN2AIPNLQ96HQ2 116 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 SPON2Q9BUD6 331 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 RNF38Q9H0F5 515 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 HIPK3Q9H422 1215 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 ALG9Q9H6U8 611 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 BATF3Q9NR55 127 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 CATSPERZQ9NTU4 200 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 NLE1Q9NVX2 485 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-208ENST00000538333 GTSE1Q9NYZ3 720 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 HSFX1Q9UBD0 423 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 G3BP2Q9UN86 482 aaKnown RBP14.03□□□□□ -0.16
LIMK1-208ENST00000538333 TBC1D30Q9Y2I9 924 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 COPG1Q9Y678 874 aaKnown RBP14.03□□□□□ -0.16
LIMK1-208ENST00000538333 A0A1B0GVM2 712 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 TCAF2A6NFQ2 919 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 INSIG1O15503 277 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 CD1DP15813 335 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 IMPDH1P20839 514 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 PRMT2P55345 433 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 NFKB2Q00653 900 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 CYLC2Q14093 348 aaPredicted RBP14.03□□□□□ -0.16
LIMK1-208ENST00000538333 CYTH1Q15438 398 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 TRIM68Q6AZZ1 485 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 NXNQ6DKJ4 435 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 CUZD1Q86UP6 607 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 KBTBD2Q8IY47 623 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 PHF21BQ96EK2 531 aa14.03□□□□□ -0.16
LIMK1-208ENST00000538333 L3HYPDHQ96EM0 354 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms