RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 BATF3Q9NR55 127 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 TRPM5Q9NZQ8 1165 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 TBC1D30Q9Y2I9 924 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 ARIH1Q9Y4X5 557 aaPredicted RBP11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 WASF2Q9Y6W5 498 aa11.45□□□□□ -0.58
SLC28A1-204ENST00000538177 SDHDO14521 159 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 INSIG1O15503 277 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 BUD23O43709 281 aaKnown RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 ZMPSTE24O75844 475 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CES1P23141 567 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CORO1AP31146 461 aaKnown RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 RGRP47804 291 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CCL23P55773 120 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 AP2B1P63010 937 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 SULT2A1Q06520 285 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 PEX6Q13608 980 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 SEMA3AQ14563 771 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 PDCD2Q16342 344 aaPredicted RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 TYSND1Q2T9J0 566 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 SH2D4BQ5SQS7 431 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 ADGRF1Q5T601 910 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 GPR158Q5T848 1215 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 OR4L1Q8NH43 312 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 SHKBP1Q8TBC3 707 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CDKN2AIPNLQ96HQ2 116 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 PPP1R36Q96LQ0 422 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CINPQ9BW66 212 aaPredicted RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 POPDC3Q9HBV1 291 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 EML4Q9HC35 981 aaKnown RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 GKN1Q9NS71 199 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 NLE1Q9NVX2 485 aaPredicted RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CRYL1Q9Y2S2 319 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 SCN5AQ14524 2016 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 A0A1B0GVM2 712 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 TCAF2A6NFQ2 919 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 TMEM233B4DJY2 109 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 LUC7L3O95232 432 aaKnown RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CRTAMO95727 393 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 PRLP01236 227 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 RHOCP08134 193 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 PIRTP0C851 137 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 HNRNPLP14866 589 aaKnown RBP eCLIP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CD1EP15812 388 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 IMPDH1P20839 514 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 KCNC1P48547 511 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 ZNF140P52738 457 aaPredicted RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CLNS1AP54105 237 aaKnown RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 MTTPP55157 894 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 NFKB2Q00653 900 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 TBL3Q12788 808 aaKnown RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 ZNF177Q13360 481 aaPredicted RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CYTH1Q15438 398 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 MUM1Q2TAK8 710 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 TMEM198Q66K66 360 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 TPGS2Q68CL5 300 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 KIAA1841Q6NSI8 718 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 ADGRG6Q86SQ4 1221 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 SDCCAG8Q86SQ7 713 aaPredicted RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 PIM3Q86V86 326 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 SNX32Q86XE0 403 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 FBXW8Q8N3Y1 598 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CEP70Q8NHQ1 597 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 SH3RF2Q8TEC5 729 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 L3HYPDHQ96EM0 354 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 TRMT2BQ96GJ1 504 aaKnown RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 LBHD1Q9BQE6 289 aaPredicted RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 TRMOQ9BU70 441 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 KLF16Q9BXK1 252 aaPredicted RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 YY1AP1Q9H869 796 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CYP4F11Q9HBI6 524 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CYP4F12Q9HCS2 524 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 CATSPERZQ9NTU4 200 aa11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 AGO1Q9UL18 857 aaKnown RBP11.44□□□□□ -0.58
SLC28A1-204ENST00000538177 UPP2O95045 317 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 F11P03951 625 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 SGSHP51688 502 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 EPHB1P54762 984 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 DSG1Q02413 1049 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 CYLC2Q14093 348 aaPredicted RBP11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 NXNQ6DKJ4 435 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 ANKRD33Q7Z3H0 272 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 KIRREL3Q8IZU9 778 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 KYQ8NBH2 561 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 JADE3Q92613 823 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 CATSPER2Q96P56 530 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 AARSD1Q9BTE6 412 aaKnown RBP11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 RNF38Q9H0F5 515 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 ALG9Q9H6U8 611 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 ZBTB26Q9HCK0 441 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 TRPC7Q9HCX4 862 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 S100A14Q9HCY8 104 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 PAK6Q9NQU5 681 aaPredicted RBP11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 INTS10Q9NVR2 710 aaKnown RBP11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 GTSE1Q9NYZ3 720 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 STOML2Q9UJZ1 356 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 PRPF19Q9UMS4 504 aaKnown RBP11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 POMPQ9Y244 141 aa11.43□□□□□ -0.58
SLC28A1-204ENST00000538177 SPO11Q9Y5K1 396 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms