RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 IRGMA1A4Y4 181 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 RNASEH1O60930 286 aaKnown RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 SEC22BO75396 215 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 IPO13O94829 963 aaKnown RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 GLP2RO95838 553 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 KCNA5P22460 613 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 MSANTD1Q6ZTZ1 278 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ALG3Q92685 438 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 KLHL5Q96PQ7 755 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 PNPLA7Q6ZV29 1317 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 IGSF9BQ9UPX0 1349 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 AATKQ6ZMQ8 1374 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 A0A0J9YVX5 310 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 H3BSA7 217 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 GLDCP23378 1020 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 PSMA1P25786 263 aaKnown RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF543Q08ER8 600 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ACVR2BQ13705 512 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 TBC1D16Q8TBP0 767 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ELMO3Q96BJ8 720 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ST14Q9Y5Y6 855 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 OAS3Q9Y6K5 1087 aaKnown RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 TANC2Q9HCD6 1990 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ZNF608Q9ULD9 1512 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 C2orf74A8MZ97 194 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 STX16-NPEPL1H3BU86 382 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 STX16O14662 325 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 SSX5O60225 188 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 SLC22A3O75751 556 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 CST1P01037 141 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 NCAM1P13591 858 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 AP3S2P59780 193 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 CDK20Q8IZL9 346 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 MPP5Q8N3R9 675 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 FCRL4Q96PJ5 515 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ELL3Q9HB65 397 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 KCNK1O00180 336 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 SLC30A4O14863 429 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 SLC22A1O15245 554 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 MID1O15344 667 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 PDPK1O15530 556 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 SUV39H1O43463 412 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 CACNB3P54284 484 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 GRB10Q13322 594 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 SH3RF1Q7Z6J0 888 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 TRIM48Q8IWZ4 208 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 COQ8AQ8NI60 647 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 VANGL1Q8TAA9 524 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 C12orf66Q96MD2 445 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ACSS3Q9H6R3 686 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 C11orf16Q9NQ32 467 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 RNF146Q9NTX7 359 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 DYRK1BQ9Y463 629 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 LRRC42Q9Y546 428 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 CNTNAP2Q9UHC6 1331 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ARHGAP32A7KAX9 2087 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 PLK4O00444 970 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 LHCGRP22888 699 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 CSTF1Q05048 431 aaKnown RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 CYP24A1Q07973 514 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 PSMD5Q16401 504 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 VWA5B1Q5TIE3 1220 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ALLCQ8N6M5 410 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 TMEM168Q9H0V1 697 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 DCSTAMPQ9H295 470 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 LNPEPQ9UIQ6 1025 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 USP20Q9Y2K6 914 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 GSAPA4D1B5 854 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 UBE2Q2LH0YL09 131 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 CYP1A2P05177 515 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 HNRNPLP14866 589 aaKnown RBP eCLIP5.68□□□□□ -1.52e-7■■■■□ 19.3
CSMD1-215ENST00000537824 TSHRP16473 764 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 RORCP51449 518 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 CDKL1Q00532 357 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 ELP6Q0PNE2 266 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 TARS2Q9BW92 718 aaKnown RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 PSME2Q9UL46 239 aa5.68□□□□□ -1.5
CSMD1-215ENST00000537824 FARP1Q9Y4F1 1045 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-215ENST00000537824 FXYD6-FXYD2A0A087WZ82 144 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 COX7A2P14406 83 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 NFKB1P19838 968 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 FNTBP49356 437 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 PABPC1LQ4VXU2 614 aaKnown RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 TIGD2Q4W5G0 525 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 CRTC2Q53ET0 693 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-215ENST00000537824 NEPROQ6NW34 567 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 GOLM1Q8NBJ4 401 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 SEC14L1Q92503 715 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 SLITRK1Q96PX8 696 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 TBL1YQ9BQ87 522 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 FXYD6Q9H0Q3 95 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 BTRCQ9Y297 605 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 AXIN2Q9Y2T1 843 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 ATP6AP2A0A1C7CYW4 349 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 A0A1W2PPM1 405 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 LRATO95237 230 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 SHPRHQ149N8 1683 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 EPHA7Q15375 998 aa5.67□□□□□ -1.5
CSMD1-215ENST00000537824 ZFYVE16Q7Z3T8 1539 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms