RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 HSPA14Q0VDF9 509 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PRR5LQ6MZQ0 368 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 UNC5AQ6ZN44 842 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SPATA31D4Q6ZUB0 917 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PHF10Q8WUB8 498 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 LENG8Q96PV6 779 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CDHR5Q9HBB8 845 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 C12orf4Q9NQ89 552 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 AJAP1Q9UKB5 411 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CNOT6Q9ULM6 557 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 LOC110117498-PIK3R3F6TDL0 507 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 MBL2P11226 248 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 COL6A2P12110 1019 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 HNRNPLP14866 589 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 HOXD10P28358 340 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CAPGP40121 348 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CLK2P49760 499 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PURAQ00577 322 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 DCAF6Q58WW2 860 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 AARS2Q5JTZ9 985 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SPANXN3Q5MJ09 141 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SLC9A4Q6AI14 798 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 TYW3Q6IPR3 259 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 IDO2Q6ZQW0 420 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CATSPER4Q7RTX7 472 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 RAB43Q86YS6 212 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 HTR3CQ8WXA8 447 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 TRMOQ9BU70 441 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SERHL2Q9H4I8 314 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 KLHL31Q9H511 634 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SERHLQ9NQF3 203 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 RAPGEFL1Q9UHV5 662 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PCDHGB4Q9UN71 923 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 NOD1Q9Y239 953 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 GMPPBQ9Y5P6 360 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 MAGEB16A2A368 324 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PGK2P07205 417 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SNHG28P0DPA3 235 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CHRNB2P17787 502 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 GSTM2P28161 218 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 NPY2RP49146 381 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 GALNT1Q10472 559 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF235Q14590 738 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ACOX1Q15067 660 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PSMD5Q16401 504 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 AKIRIN2Q53H80 203 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 FAM117BQ6P1L5 589 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 EPGNQ6UW88 154 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 FRMD7Q6ZUT3 714 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SH3BP5LQ7L8J4 393 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 THAP5Q7Z6K1 395 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SLC41A1Q8IVJ1 513 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ZDHHC14Q8IZN3 488 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 UXS1Q8NBZ7 420 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CYP2W1Q8TAV3 490 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 NSUN6Q8TEA1 469 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 FCGR1BQ92637 280 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 MMP27Q9H306 513 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 RNF146Q9NTX7 359 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 OLAHQ9NV23 265 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 MRPL39Q9NYK5 338 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CCDC59Q9P031 241 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PKP3Q9Y446 797 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ERI2A8K979 691 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 EGFRP00533 1210 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 LTFP02788 710 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CNPP09543 421 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 TSPAN8P19075 237 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 MIPP30301 263 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 MERTKQ12866 999 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 MGAT5BQ3V5L5 792 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SPDYE7PQ495Y7 208 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SLC51BQ86UW2 128 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SLC22A16Q86VW1 577 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 LRRC15Q8TF66 581 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF606Q8WXB4 792 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 HDAC2Q92769 488 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ASB2Q96Q27 587 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 APBA2Q99767 749 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ELOVL6Q9H5J4 265 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SNX15Q9NRS6 342 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 KRT84Q9NSB2 600 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 MKL2Q9ULH7 1088 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PRR12Q9ULL5 1215 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SPO11Q9Y5K1 396 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 ABCB7O75027 752 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 NDUFS3O75489 264 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 RECQL5O94762 991 aaPredicted RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CHRNA5P30532 468 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SREBF1P36956 1147 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 NOVP48745 357 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 PPP5CP53041 499 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 CCNA1P78396 465 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 STILQ15468 1287 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 TMEM214Q6NUQ4 689 aaKnown RBP5.41□□□□□ -1.54
PTPRD-213ENST00000537002 SMIM5Q71RC9 77 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 RRM2BQ7LG56 351 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 UBE2Q1Q7Z7E8 422 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 KRT73Q86Y46 540 aa5.41□□□□□ -1.54
PTPRD-213ENST00000537002 OR8H1Q8NGG4 311 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms