RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 NHLH2Q02577 135 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 RUNX2Q13950 521 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 PROSER3Q2NL68 480 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 CD300EQ496F6 205 aaPredicted RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 MDH1BQ5I0G3 518 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 DNTTIP2Q5QJE6 756 aaKnown RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 TEX35Q5T0J7 233 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 SPOUT1Q5T280 376 aaKnown RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM91A1Q658Y4 838 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 TMEM270Q6UE05 265 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 KYAT3Q6YP21 454 aaKnown RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 HTR3DQ70Z44 454 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 PLEKHH3Q7Z736 793 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 CENPVQ7Z7K6 275 aaPredicted RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 MAPKAPK5Q8IW41 473 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 KLHL7Q8IXQ5 586 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 ANKRD35Q8N283 1001 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 AFAP1Q8N556 730 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 IPMKQ8NFU5 416 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 CFAP61Q8NHU2 1237 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 MAFAQ8NHW3 353 aaPredicted RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 RP9Q8TA86 221 aaKnown RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 CCDC110Q8TBZ0 833 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 TRPC4APQ8TEL6 797 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 AKAP1Q92667 903 aaKnown RBP eCLIP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 DNASE1L2Q92874 299 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 ZKSCAN4Q969J2 545 aaPredicted RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 HES6Q96HZ4 224 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 LINC00615Q96LM1 132 aaPredicted RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 NEK1Q96PY6 1258 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 FYTTD1Q96QD9 318 aaKnown RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 PRAM1Q96QH2 718 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 NEU1Q99519 415 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 SLC38A3Q99624 504 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 ALG8Q9BVK2 526 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM129AQ9BZQ8 928 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 RTN4RQ9BZR6 473 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 SPATC1LQ9H0A9 340 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 C12orf65Q9H3J6 166 aaKnown RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 DNAJC17Q9NVM6 304 aaKnown RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 GAR1Q9NY12 217 aaKnown RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 GRHL1Q9NZI5 618 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 SEMA5BQ9P283 1151 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 TRPC4Q9UBN4 977 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 AMFRQ9UKV5 643 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 FZD4Q9ULV1 537 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 SNX7Q9UNH6 387 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 AURKCQ9UQB9 309 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 B3GNT3Q9Y2A9 372 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 CARD8Q9Y2G2 431 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 RPH3AQ9Y2J0 694 aaPredicted RBP4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 KCNK7Q9Y2U2 307 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM96BQ9Y3D0 163 aa4.4□□□□□ -1.71
AC055878.1-201ENST00000531858 SYCE3A1L190 88 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 CBY3A6NI87 242 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 SDR42E2A6NKP2 422 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 B8ZZF3 427 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 CLIC2O15247 247 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 OGG1O15527 345 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 DIAPH2O60879 1101 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 PEX11AO75192 247 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 USP12O75317 370 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 CNTN5O94779 1100 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 SLCO2B1O94956 709 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 NKX2-2O95096 273 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 MBPP02686 304 aaPredicted RBP4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 ALPPP05187 535 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 INHBAP08476 426 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 ALPPL2P10696 532 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 UROSP10746 265 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 SFTPCP11686 197 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 GJA1P17302 382 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 TNFRSF1AP19438 455 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 MYF6P23409 242 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 ACADLP28330 430 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 TYK2P29597 1187 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 ASMTP46597 345 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 LIMS1P48059 325 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 CASP9P55211 416 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 TPTEP56180 551 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 ST8SIA6P61647 398 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 GPC5P78333 572 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 RAE1P78406 368 aaKnown RBP4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 FAM189BP81408 668 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 MRPS34P82930 218 aaKnown RBP4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 DEUP1Q05D60 604 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 DLX2Q07687 328 aaPredicted RBP4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 GAMTQ14353 236 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 GRM7Q14831 915 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 RRS1Q15050 365 aaKnown RBP4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 ELAVL1Q15717 326 aaKnown RBP4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 CYP2A13Q16696 494 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 CDO1Q16878 200 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 LEXMQ3ZCV2 418 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 CEP55Q53EZ4 464 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 SHEQ5VZ18 495 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 TMEM268Q5VZI3 342 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 NEK5Q6P3R8 708 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 PPP1R21Q6ZMI0 780 aa4.39□□□□□ -1.71
AC055878.1-201ENST00000531858 ZER1Q7Z7L7 766 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms