RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 PDCD6IPQ8WUM4 868 aaKnown RBP20.97■□□□□ 0.95
SMPD1-204ENST00000530395 TEKT4Q8WW24 435 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 SPOCK2Q92563 424 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 SYN2Q92777 582 aaPredicted RBP20.97■□□□□ 0.95
SMPD1-204ENST00000530395 CCDC74AQ96AQ1 378 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 CSPG4P5Q96PW8 444 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 NUDCD1Q96RS6 583 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 DPH1Q9BZG8 443 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 WDR26Q9H7D7 661 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 KCTD5Q9NXV2 234 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 CCDC187A0A096LP49 1063 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 TK2O00142 265 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 PDE2AO00408 941 aaPredicted RBP20.96■□□□□ 0.95
SMPD1-204ENST00000530395 ATXN7O15265 892 aaPredicted RBP20.96■□□□□ 0.95
SMPD1-204ENST00000530395 CPP00450 1065 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 RARAP10276 462 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 MLLT3P42568 568 aaPredicted RBP20.96■□□□□ 0.95
SMPD1-204ENST00000530395 HGSNATQ68CP4 663 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 FOXR1Q6PIV2 292 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 NIPA2Q8N8Q9 360 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 OR1E3Q8WZA6 343 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 CCDC97Q96F63 343 aaPredicted RBP20.96■□□□□ 0.95
SMPD1-204ENST00000530395 SLC46A1Q96NT5 459 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 GFM1Q96RP9 751 aaKnown RBP20.96■□□□□ 0.95
SMPD1-204ENST00000530395 FUCA2Q9BTY2 467 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 FGF22Q9HCT0 170 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 ETNK2Q9NVF9 386 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 B4GALT6Q9UBX8 382 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 IP6K2Q9UHH9 426 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 ANAPC7Q9UJX3 599 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 ATMQ13315 3056 aa20.96■□□□□ 0.95
SMPD1-204ENST00000530395 TMEM202A6NGA9 273 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 A8MX80 341 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 TMX2-CTNND1H3BSU7 103 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 NTN3O00634 580 aaPredicted RBP20.95■□□□□ 0.94
SMPD1-204ENST00000530395 TNFRSF10CO14798 259 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 KLK10O43240 276 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 HTRA2O43464 458 aaPredicted RBP20.95■□□□□ 0.94
SMPD1-204ENST00000530395 SERPING1P05155 500 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 TCF4P15884 667 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 CDH6P55285 790 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 FANCCQ00597 558 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 KRT81Q14533 505 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 TSR1Q2NL82 804 aaKnown RBP20.95■□□□□ 0.94
SMPD1-204ENST00000530395 RALGPS1Q5JS13 557 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 TAF8Q7Z7C8 310 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 LSM14AQ8ND56 463 aaKnown RBP20.95■□□□□ 0.94
SMPD1-204ENST00000530395 SLC39A7Q92504 469 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 IQCDQ96DY2 449 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 NUS1Q96E22 293 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 MGME1Q9BQP7 344 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 THAP2Q9H0W7 228 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 MOSPD1Q9UJG1 213 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 PCDHGC4Q9Y5F7 938 aa20.95■□□□□ 0.94
SMPD1-204ENST00000530395 A0A1W2PNU3 283 aaPredicted RBP20.94■□□□□ 0.94
SMPD1-204ENST00000530395 TTC24A2A3L6 582 aaPredicted RBP20.94■□□□□ 0.94
SMPD1-204ENST00000530395 MAFKO60675 156 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 PEX11BO96011 259 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 CYP2A6P11509 494 aaPredicted RBP20.94■□□□□ 0.94
SMPD1-204ENST00000530395 CR2P20023 1033 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 VIPR1P32241 457 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 TRIM23P36406 574 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 MMP13P45452 471 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 PDX1P52945 283 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 EIF3IQ13347 325 aaKnown RBP20.94■□□□□ 0.94
SMPD1-204ENST00000530395 MARC1Q5VT66 337 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 PNCKQ6P2M8 343 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 NYAP1Q6ZVC0 841 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 FAM46DQ8NEK8 389 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 LIN37Q96GY3 246 aaPredicted RBP20.94■□□□□ 0.94
SMPD1-204ENST00000530395 COQ10AQ96MF6 247 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 NSMCE3Q96MG7 304 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 NUP85Q9BW27 656 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 STRADBQ9C0K7 418 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 CBX8Q9HC52 389 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 PCDH18Q9HCL0 1135 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 PHTF1Q9UMS5 762 aa20.94■□□□□ 0.94
SMPD1-204ENST00000530395 D6RAR5 112 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 RPLP0P05388 317 aaKnown RBP20.93■□□□□ 0.94
SMPD1-204ENST00000530395 MYCLP1P12525 358 aaPredicted RBP20.93■□□□□ 0.94
SMPD1-204ENST00000530395 GM2AP17900 193 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 UBASH3AP57075 661 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 ZBED6P86452 979 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 SLC25A11Q02978 314 aaKnown RBP20.93■□□□□ 0.94
SMPD1-204ENST00000530395 CNGA3Q16281 694 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 KCTD16Q68DU8 428 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 PGBD5Q8N414 524 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 GPR156Q8NFN8 814 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 PRR11Q96HE9 360 aaPredicted RBP20.93■□□□□ 0.94
SMPD1-204ENST00000530395 NOD2Q9HC29 1040 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 EPB41L5Q9HCM4 733 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 CYP4F12Q9HCS2 524 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 MRPL40Q9NQ50 206 aaKnown RBP20.93■□□□□ 0.94
SMPD1-204ENST00000530395 PHPT1Q9NRX4 125 aaPredicted RBP20.93■□□□□ 0.94
SMPD1-204ENST00000530395 RCOR3Q9P2K3 495 aaPredicted RBP20.93■□□□□ 0.94
SMPD1-204ENST00000530395 RABGEF1Q9UJ41 708 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 UNC13CQ8NB66 2214 aa20.93■□□□□ 0.94
SMPD1-204ENST00000530395 SYCE3A1L190 88 aa20.92■□□□□ 0.94
SMPD1-204ENST00000530395 MYO1FO00160 1098 aa20.92■□□□□ 0.94
SMPD1-204ENST00000530395 CASC3O15234 703 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms