RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ARFGAP3Q9NP61 516 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 MCM9Q9NXL9 1143 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 RCOR1Q9UKL0 485 aa2.61□□□□□ -1.99
ECHDC1-219ENST00000526299 HMX3A6NHT5 357 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 SORBS2O94875 1100 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 TNNT1P13805 278 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 RXRAP19793 462 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 ITGAXP20702 1163 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 S1PR1P21453 382 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 SERPINF1P36955 418 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 HOXA1P49639 335 aaPredicted RBP2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 CLK1P49759 484 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 SMAD1Q15797 465 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 CCNYL2Q5T2Q4 361 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 IL31Q6EBC2 164 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 SLC36A4Q6YBV0 504 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 CHERPQ8IWX8 916 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 DSELQ8IZU8 1212 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 OR6Y1Q8NGX8 325 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 ZC3HAV1LQ96H79 300 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 ZNF414Q96IQ9 312 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 ST6GAL2Q96JF0 529 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 LRR1Q96L50 414 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 LINC00479Q96M42 142 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 PDZD7Q9H5P4 517 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 CHODLQ9H9P2 273 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 UPF2Q9HAU5 1272 aaKnown RBP2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 HCFC1R1Q9NWW0 138 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 TMEM160Q9NX00 188 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 TINAGQ9UJW2 476 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 A3GALT2U3KPV4 340 aa2.6□□□□□ -1.99
ECHDC1-219ENST00000526299 ARHGAP10A1A4S6 786 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 HSPB2A8KAH6 182 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 ZNF821O75541 412 aaPredicted RBP2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 SKAP2O75563 359 aaPredicted RBP2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 IGLV1-44P01699 117 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 G6PDP11413 515 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 MYOD1P15172 320 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 CD58P19256 250 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 DDIT3P35638 169 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 NEK3P51956 506 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 NR1H2P55055 460 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 SEC61BP60468 96 aaKnown RBP2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 ISL1P61371 349 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 PDE1BQ01064 536 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 TBL3Q12788 808 aaKnown RBP2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 GTF2H2Q13888 395 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 HSPB2Q16082 182 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 CCDC96Q2M329 555 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 MMEL1Q495T6 779 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 GTF2H2CQ6P1K8 395 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 MOB3CQ70IA8 216 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 TBC1D26Q86UD7 250 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 FOXRED2Q8IWF2 684 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 C1orf87Q8N0U7 546 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 STPG4Q8N801 248 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 SNAPC3Q92966 411 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 STAMBPL1Q96FJ0 436 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 CDK19Q9BWU1 502 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 TRIM15Q9C019 465 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 WDR13Q9H1Z4 485 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 SLC32A1Q9H598 525 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 SMYD2Q9NRG4 433 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 MAP3K20Q9NYL2 800 aaKnown RBP2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 CD207Q9UJ71 328 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 AMDHD2Q9Y303 409 aa2.59□□□□□ -1.99
ECHDC1-219ENST00000526299 WDR1O75083 606 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 PCNAP12004 261 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 ZNF26P17031 533 aaPredicted RBP2.58□□□□□ -2
ECHDC1-219ENST00000526299 PTPN2P17706 415 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 CHATP28329 748 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 PDIA3P30101 505 aaKnown RBP2.58□□□□□ -2
ECHDC1-219ENST00000526299 DCTP40126 519 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 CLCNKAP51800 687 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 GALNT1Q10472 559 aaPredicted RBP2.58□□□□□ -2
ECHDC1-219ENST00000526299 PICALMQ13492 652 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 SIRPB2Q5JXA9 342 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 CBWD5Q5RIA9 395 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 LIN54Q6MZP7 749 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 TAOK1Q7L7X3 1001 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 ANKRD52Q8NB46 1076 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 SCCPDHQ8NBX0 429 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 AGBL3Q8NEM8 1001 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 WDR20Q8TBZ3 569 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 TMEM190Q8WZ59 177 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 TM9SF4Q92544 642 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 ZNF653Q96CK0 615 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 ART5Q96L15 291 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 ASCL2Q99929 193 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 SYT17Q9BSW7 474 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 HAUS8Q9BT25 410 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 SLC52A3Q9NQ40 469 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 OR2W1Q9Y3N9 320 aa2.58□□□□□ -2
ECHDC1-219ENST00000526299 A0A087WV62 115 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 A0A0J9YWU9 116 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 A0A0U1RQF3 1178 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 CEP104O60308 925 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 CHRM4P08173 479 aa2.57□□□□□ -2
ECHDC1-219ENST00000526299 SLC2A4P14672 509 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms