RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ALDH1A2O94788 518 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 ITGB7P26010 798 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 TMPRSS15P98073 1019 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 ZNF844Q08AG5 666 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 PTPRCAPQ14761 206 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 EFTUD2Q15029 972 aaKnown RBP eCLIP21.43■■□□□ 1.023e-6■■■□□ 18.3
R3HCC1-208ENST00000522012 LONRF1Q17RB8 773 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 SKIDA1Q1XH10 827 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 FAM46CQ5VWP2 391 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 KIAA1211LQ6NV74 962 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 LYSMD3Q7Z3D4 306 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 TTC30BQ8N4P2 665 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 STYXQ8WUJ0 223 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 ARRDC3Q96B67 414 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 MRRFQ96E11 262 aaKnown RBP21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 CERS2Q96G23 380 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 SHDQ96IW2 340 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 RSPH9Q9H1X1 276 aaPredicted RBP21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 MRPS17Q9Y2R5 130 aaKnown RBP21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 C1orf232A0A0U1RR37 186 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 KRBA1A5PL33 1030 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 NPIPB15A6NHN6 443 aaPredicted RBP21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 POC1B-GALNT4F8VUJ3 575 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 VAPBO95292 243 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 ERVK-10P10266 1014 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 LPOP22079 712 aaPredicted RBP21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 PDE1BQ01064 536 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 KLHL38Q2WGJ6 581 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 KBTBD12Q3ZCT8 623 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 CYS1Q717R9 158 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 PARS2Q7L3T8 475 aaKnown RBP21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 CTAGE3PQ8IX95 158 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 SIX5Q8N196 739 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 OR13C4Q8NGS5 318 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 DNAJC1Q96KC8 554 aaKnown RBP21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 MCCC1Q96RQ3 725 aaPredicted RBP21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 ZFYVE1Q9HBF4 777 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 TTC28Q96AY4 2481 aa21.42■■□□□ 1.02
R3HCC1-208ENST00000522012 TLDC2A0PJX2 215 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 CCL22O00626 93 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 CLDN7O95471 211 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 IVLP07476 585 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 NFKBIAP25963 317 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 SLCO1A2P46721 670 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 ZNF140P52738 457 aaPredicted RBP21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 SATB1Q01826 763 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 MGAT5Q09328 741 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 FRG1Q14331 258 aaKnown RBP21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 EOGTQ5NDL2 527 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 FBXL19Q6PCT2 694 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 CRTC1Q6UUV9 634 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 TSPAN33Q86UF1 283 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 RASSF3Q86WH2 238 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 CACUL1Q86Y37 369 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 UBALD2Q8IYN6 164 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 OR4K2Q8NGD2 314 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 OR13J1Q8NGT2 312 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 OR2T3Q8NH03 318 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 EPS8L3Q8TE67 593 aaKnown RBP21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 LYSMD1Q96S90 227 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 BPIFA1Q9NP55 256 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 PCDH12Q9NPG4 1184 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 B4GALT6Q9UBX8 382 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 MUC3AQ02505 3323 aa21.41■■□□□ 1.02
R3HCC1-208ENST00000522012 A0A1W2PQF6 199 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 FAM159BA6NKW6 160 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 AGPSO00116 658 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 PLK4O00444 970 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 RASGRF2O14827 1237 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 STX7O15400 261 aaKnown RBP21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 CHRNB1P11230 501 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 CYP2A6P11509 494 aaPredicted RBP21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 COL9A1P20849 921 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 UBXN2BQ14CS0 331 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 CST6Q15828 149 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 CDKN3Q16667 212 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 KRT71Q3SY84 523 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 HSF5Q4G112 596 aaPredicted RBP21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 ZNF776Q68DI1 518 aaPredicted RBP21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 PDPK2PQ6A1A2 396 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 KIAA0930Q6ICG6 404 aaPredicted RBP21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 KCNMB4Q86W47 210 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 GJD3Q8N144 294 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 PPM1NQ8N819 430 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 CDKL2Q92772 493 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 PEX13Q92968 403 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 HDAC10Q969S8 669 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 ROPN1BQ9BZX4 212 aaPredicted RBP21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 ROPN1Q9HAT0 212 aaPredicted RBP21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 LMAN1LQ9HAT1 526 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 SMYD2Q9NRG4 433 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 NLE1Q9NVX2 485 aaPredicted RBP21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 POLR3BQ9NW08 1133 aaPredicted RBP21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 VPS18Q9P253 973 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 RIMKLBQ9ULI2 386 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 PKP3Q9Y446 797 aa21.4■■□□□ 1.02
R3HCC1-208ENST00000522012 CXorf49A8MYA2 514 aaPredicted RBP21.39■■□□□ 1.02
R3HCC1-208ENST00000522012 GOLGA8KD6RF30 607 aa21.39■■□□□ 1.02
R3HCC1-208ENST00000522012 GOLGA8TH3BQL2 631 aa21.39■■□□□ 1.02
R3HCC1-208ENST00000522012 RPP40O75818 363 aaKnown RBP21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms