RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 PHF19Q5T6S3 580 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 CCDC181Q5TID7 509 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 NT5DC4Q86YG4 428 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 CCNJLQ8IV13 435 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 SFTPA2Q8IWL1 248 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 GPD1LQ8N335 351 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 RBMXL3Q8N7X1 1067 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 Q8N9G6 341 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 RCBTB1Q8NDN9 531 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 POMGNT1Q8WZA1 660 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 GLMNQ92990 594 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 CCDC127Q96BQ5 260 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 PCDHB18PQ96TA0 734 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 BARD1Q99728 777 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 TMEM8AQ9HCN3 771 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 MAP10Q9P2G4 905 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 COPG2Q9UBF2 871 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 RNF14Q9UBS8 474 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 DMGDHQ9UI17 866 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 KLF2Q9Y5W3 355 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 HS3ST3A1Q9Y663 406 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 MYO7BQ6PIF6 2116 aa7.4□□□□□ -1.23
CTNNA1-227ENST00000521387 ANK3Q12955 4377 aaKnown RBP7.4□□□□□ -1.23
CTNNA1-227ENST00000521387 MXRA5Q9NR99 2828 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 ANK2Q01484 3957 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 H3BQF6 201 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 KRT19P08727 400 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 TMEM253P0C7T8 217 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 CCDC172P0C7W6 258 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 MYBL2P10244 700 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 TSHRP16473 764 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 AKT2P31751 481 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 GTF2H1P32780 548 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 USP8P40818 1118 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 CSKP41240 450 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 ITGA1P56199 1179 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 RBP5P82980 135 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 MC1RQ01726 317 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 GABPB1Q06547 395 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 CETN1Q12798 172 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 CASP8Q14790 479 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 IFI16Q16666 785 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 MPPE1Q53F39 396 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 PRRT3Q5FWE3 981 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 TMEM198Q66K66 360 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 SEL1L3Q68CR1 1132 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 SLC6A19Q695T7 634 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 KRT39Q6A163 491 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 ESRP1Q6NXG1 681 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 PTAR1Q7Z6K3 402 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 NOP9Q86U38 636 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 NT5DC3Q86UY8 548 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 FAM35AQ86V20 835 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 HORMAD1Q86X24 394 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 DCP2Q8IU60 420 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 APLFQ8IW19 511 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 GSPT2Q8IYD1 628 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 FAM71AQ8IYT1 594 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 NLGN4XQ8N0W4 816 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 ARL10Q8N8L6 244 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 NLGN4YQ8NFZ3 816 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 SLC35G2Q8TBE7 412 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 TAS1R2Q8TE23 839 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 SHC3Q92529 594 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 TAF4BQ92750 862 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 ART4Q93070 314 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 ZBTB9Q96C00 473 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 PBKQ96KB5 322 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 NT5C1BQ96P26 610 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 SMR3AQ99954 134 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 FAM213AQ9BRX8 229 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 SEPT11Q9NVA2 429 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 SIRPGQ9P1W8 387 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 SPASTQ9UBP0 616 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 AGO2Q9UKV8 859 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 ERVW-1Q9UQF0 538 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 SCML2Q9UQR0 700 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 NEU2Q9Y3R4 380 aa7.39□□□□□ -1.23
CTNNA1-227ENST00000521387 EDDM13A0A1B0GTR0 161 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 ANKRD62A6NC57 917 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 ZSCAN5CA6NGD5 496 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 ZNF233A6NK53 670 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 A6NNZ2 444 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 HHLA1C9JL84 531 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 H0YCG3 227 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 RNF103O00237 685 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 CES2O00748 559 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 POLR3GO15318 223 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 DDX3YO15523 660 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 B4GAT1O43505 415 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 CEP104O60308 925 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 BUB1BO60566 1050 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 IL18RAPO95256 599 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 CALCAP01258 141 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 FTLP02792 175 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 ANXA6P08133 673 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 COX6B1P14854 86 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 MCM3P25205 808 aa7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 MAP4P27816 1152 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-227ENST00000521387 SSTR2P30874 369 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms